New model in OGS2.0 | DPOGS209888  |
---|---|
Genomic Position | scaffold82:- 89323-93535 |
See gene structure | |
CDS Length | 1131 |
Paired RNAseq reads   | 275 |
Single RNAseq reads   | 771 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004210 (6e-115) |
Best Drosophila hit   | CG12134, isoform A (6e-45) |
Best Human hit | WD repeat-containing protein 89 (1e-18) |
Best NR hit (blastp)   | WD-repeat protein YNL035C, putative [Pediculus humanus corporis] (5e-66) |
Best NR hit (blastx)   | WD-repeat protein YNL035C, putative [Pediculus humanus corporis] (1e-66) |
GeneOntology terms    | GO:0003674 molecular_function GO:0008150 biological_process GO:0005634 nucleus |
InterPro families    | IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat IPR011046 WD40 repeat-like-containing domain |
Orthology group | MCL12227 |
Nucleotide sequence:
ATGGCGGATATTGTAGAAAATCTAGAAATAGATAAAGATACCGTATCTGTAGATGAACTA
GAAAAAATATTTAGTAAAAAATATAACTTGCTGACTGAAACCGCGGTGACCCTAAAGAAA
ACATACATCAATAAACTCAGTATAAACAAATCTCTCCATGTAGCAGTCAGTGTACTGGAT
AACAGTATAGAAGTTTATCAACTCACTAATTCCTCATTATCTAAAGTTTGCCGACTGAGT
GGTCACCGGGACAGTCTTACTGAACTAGTGTTCAATCCTAAGGAAGAGCATCTACTGTAT
TCGGCTGGTCACGATGGGATTAAGTTGTGGGACACAAGAAGTAATGGATTGTGTGCACAA
GAATATAAAGATGAGCCGGATGCCGTTCCTCGTCAGTATGAGTGTATGGACGTGTCGTGT
TCGGGGCGGCTGCTAGCTGCGGGCAGTGCGCTTCAGGAGGACGACGCATACCTTGTGTTC
TGGGATGTGCGGAACCCACAACCTCTCGGAGGTTACTGGAACTCGCATACTGATGATATA
ACACAGGTGAAATTCCATAAAGAAAAATCCGAGATACTTTCGTCGGGGTCTCTGGACGGT
CTTCTTAATATATACAATGTACTGGAGGCGACGGAGGACGACGCGCTCACTTACTCACTG
AACGTTGACAACTCCATAGAGAAGATATCCTGGTTGAGTGAGGACGTCGTCGCGTGCTGC
ACTCAGTCACACGACGCACAGCTCTGGAACAGCTGTAGTGGAGATCTGCTGCAGAGTTAC
GATAGAGAGAAGATCGCTCGAGGCATTAAGAGACTGCGAGCTGATGACTGCTACCTGGTC
GATATGTTCACGTCTAGGGACAAATCAACCGTTATATTGACAGGATCCTACAGCGGGGAG
GGGAATCTTTTGAGGTCAGCGACCGCTGAGGACAAGAAATTGAGACTATCTTGTAACTTT
ATAAAAAACAAACAAGTGGTGAGGTGTTTGGGATATGATGCAGAGAGAGACATATTAATA
ACAGCTGGCGAGTCGGGGCTGGTGACAGTGTGGAGCCCTGACGGACAAGGACTCTCTCAG
GAGACGAAGCAGAGGAGCCGAGCACATAACAATAGACACAGACCCTACTGA
Protein sequence:
MADIVENLEIDKDTVSVDELEKIFSKKYNLLTETAVTLKKTYINKLSINKSLHVAVSVLD
NSIEVYQLTNSSLSKVCRLSGHRDSLTELVFNPKEEHLLYSAGHDGIKLWDTRSNGLCAQ
EYKDEPDAVPRQYECMDVSCSGRLLAAGSALQEDDAYLVFWDVRNPQPLGGYWNSHTDDI
TQVKFHKEKSEILSSGSLDGLLNIYNVLEATEDDALTYSLNVDNSIEKISWLSEDVVACC
TQSHDAQLWNSCSGDLLQSYDREKIARGIKRLRADDCYLVDMFTSRDKSTVILTGSYSGE
GNLLRSATAEDKKLRLSCNFIKNKQVVRCLGYDAERDILITAGESGLVTVWSPDGQGLSQ
ETKQRSRAHNNRHRPY