DPGLEAN02104 in OGS1.0

New model in OGS2.0DPOGS209911 
Genomic Positionscaffold82:+ 338686-339360
See gene structure
CDS Length675
Paired RNAseq reads  191
Single RNAseq reads  768
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA004151 (2e-78)
Best Drosophila hit  Sox box protein 14, isoform B (7e-27)
Best Human hittranscription factor SOX-11 (4e-26)
Best NR hit (blastp)  PREDICTED: similar to Putative transcription factor SOX-14 [Tribolium castaneum] (4e-43)
Best NR hit (blastx)  hypothetical protein TcasGA2_TC008936 [Tribolium castaneum] (7e-37)
GeneOntology terms












  
GO:0045449 regulation of transcription
GO:0006350 transcription
GO:0003677 DNA binding
GO:0050821 protein stabilization
GO:0002328 pro-B cell differentiation
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0016563 transcription activator activity
GO:0007507 heart development
GO:0030217 T cell differentiation
GO:0060070 canonical Wnt receptor signaling pathway
GO:0030177 positive regulation of Wnt receptor signaling pathway
GO:0005634 nucleus
GO:0001666 response to hypoxia
GO:0031017 exocrine pancreas development
InterPro families
  
IPR000910 High mobility group, HMG1/HMG2
IPR009071 High mobility group, superfamily
Orthology groupMCL19620

Nucleotide sequence:

ATGAATGCGTTTATGGTTTGGTCTCAAATCGAACGCAGAAAAATTTGCGAACAAACTCCA
GATATGCATAATGCAGAAATTTCTAAGAACTTAGGGCGAGTTTGGAAAACGCTAAACGAT
GAGGAAAGGCAGCCTTTTATAGATGAAGCAGAAAGGCTGAGACAACTGCATATGCGCGAG
TACCCTGATTATAAATATAGGCCTCGCAAGAAAACAGCAAAACCTGCACAAAGAAGTGGT
GCAATAACCAAGCAGAAGCGTAAACAAAGAGCTGACAGTAACAACAACAGAGGTGTATCC
AGACGGAGAACGCGGACGGTCCCAAGCATCTCCAGTGTTCCAATGGAAACGCCAGCTCCT
CCACCACTGCCAGCATCCCCAGCGGGATCGCCGGATTCTCCTGAATCTGCGTGTTTCTAC
GACGATAACACGAAACGCGATCAATCAGACCTAACTGAACTTTATTCAATTACGGATTTA
TTTACGTTACCAGCAGACTGTGAAGTTGATCTAGACGCGTTGACGGAAATGGAGGACTTT
GAGACGGCATCTTCTTCGTCAGGATCACACTTTGAGTTCTCATGCACGCCGGACGTGTCT
GATATGCTCAGTGAGATTGGCGTAGCAGGGGATTGGGATGACCCTACTTTCTCATCGTAC
CTTACGTCGTCTTAA

Protein sequence:

MNAFMVWSQIERRKICEQTPDMHNAEISKNLGRVWKTLNDEERQPFIDEAERLRQLHMRE
YPDYKYRPRKKTAKPAQRSGAITKQKRKQRADSNNNRGVSRRRTRTVPSISSVPMETPAP
PPLPASPAGSPDSPESACFYDDNTKRDQSDLTELYSITDLFTLPADCEVDLDALTEMEDF
ETASSSSGSHFEFSCTPDVSDMLSEIGVAGDWDDPTFSSYLTSS