| New model in OGS2.0 | DPOGS205914 |
|---|---|
| Genomic Position | scaffold2616:- 4680-7219 |
| See gene structure | |
| CDS Length | 744 |
| Paired RNAseq reads | 71 |
| Single RNAseq reads | 192 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007015 (2e-36) |
| Best Drosophila hit | cuticular protein 47Ef, isoform B (8e-22) |
| Best Human hit | ND |
| Best NR hit (blastp) | cuticular protein RR-1 motif 8 [Bombyx mori] (5e-47) |
| Best NR hit (blastx) | RecName: Full=Pupal cuticle protein 20; AltName: Full=MS-PCP20; Short=MsCP20; Flags: Precursor (3e-42) |
| GeneOntology terms | GO:0008010 structural constituent of chitin-based larval cuticle GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | MCL23779 |
Nucleotide sequence:
ATGTCTTCGGTGACGATATCGTTGTTGTCAGTCGTGATAGCACTAGCTTCGTGTGGCAGA
CTCGAACCTCAATACTTACCACCACGTGGAGCTGGTGGTGGCGGCGGTGGTGGAGGTAAC
AGCGGCCTCGGAGGTGGCAGCGGATTTGGAGGTGGTGGCGGTTTTGGAGGCGGAAGCGGA
TTTGGGGGCGGTTCAGGGTCCGGAGCTAATATTCCCATCCTCAGCTACACGAATGAAAAC
AACGGTGACGGTACTTATAGGTTCAGCTATGAGACTGGAAACGGTATATCAGCCCAAGAA
AGCGGTGCTCCACGTGCCCCAGGTCCCGAAGGTCCAGCGGTGACTGCTGAAGGAGCCTTT
TCCTATCGCTCTCCCGATGGCCAACAAATTTCCCTCACTTACACCGCCGATGAAACCGGA
TTCCATCCCGTCGGCTCACATCTTCCCACTCCACCCCCCATCCCTGAGGCCATCCTCCAA
TCCATTGAATTCAACAGACGCAATCCATCCTCTGAAGGAGCATATAATGGCGGAGCTGGT
TCCGGTGGTGGCAGAGGATCTGGTAGTGGCAGCGGGTTTGGAGGATCTGGAGGTGGCAGC
GGATTCGGAGGATCTGGAGGAGGCAGCGGTAACGGATTTGGAGGATCTGGAGGTGGAAGC
GGATTCGGAGGATCTGGTGGAGGAAGTGGTTTCGGTGGACCGGGTTCAGGTGGCGCAGGA
GGTGCTGCAGGTTATCACTATTAA
Protein sequence:
MSSVTISLLSVVIALASCGRLEPQYLPPRGAGGGGGGGGNSGLGGGSGFGGGGGFGGGSG
FGGGSGSGANIPILSYTNENNGDGTYRFSYETGNGISAQESGAPRAPGPEGPAVTAEGAF
SYRSPDGQQISLTYTADETGFHPVGSHLPTPPPIPEAILQSIEFNRRNPSSEGAYNGGAG
SGGGRGSGSGSGFGGSGGGSGFGGSGGGSGNGFGGSGGGSGFGGSGGGSGFGGPGSGGAG
GAAGYHY