| New model in OGS2.0 | DPOGS210140 |
|---|---|
| Genomic Position | scaffold978:+ 21685-40598 |
| See gene structure | |
| CDS Length | 2202 |
| Paired RNAseq reads | 11904 |
| Single RNAseq reads | 29953 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003788 (1e-74) |
| Best Drosophila hit | lethal (2) 44DEa, isoform I (1e-92) |
| Best Human hit | long-chain-fatty-acid--CoA ligase 4 isoform 2 (6e-56) |
| Best NR hit (blastp) | GI18805 [Drosophila mojavensis] (5e-116) |
| Best NR hit (blastx) | GD10588 [Drosophila simulans] (1e-101) |
| GeneOntology terms | GO:0004467 long-chain fatty acid-CoA ligase activity GO:0008152 metabolic process GO:0005811 lipid particle GO:0007399 nervous system development GO:0005783 endoplasmic reticulum GO:0005737 cytoplasm GO:0010890 positive regulation of sequestering of triglyceride GO:0007411 axon guidance |
| InterPro families | IPR001804 Isocitrate/isopropylmalate dehydrogenase IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
| Orthology group | MCL11684 |
Nucleotide sequence:
ATGACCTTCCGTAACAACGTGAAGGTCTCACTTCCCGTCGTCCGGCCTTCGCCCCCGCCC
CCCGCCCTCAATACGAATTTTGTATCCCGGAGGAAGCAGCGTGTCGCTTTCGCTCGGTCA
GATGAGTGCGAGCGAACCGGCCATGAACTGTATGTAACAGATAACAGGATTGCTATTGAA
TATCTCACAGAGAATACATTTGAGTATGAGTCAGTTCGACGGAAGCCCCAGGTTCCCCTA
CTCCTAAAATTACTTCCCCCTACTCCTAGGTTACCTCTCTTGTCCCAAATCCAAATAGTC
CCCGAGAACGTAAGACAACTGCAGCGGCTTTTTACACGTGAGAGTGTCCACGATGGGCCT
GACTCGTGGTGGGTGTCGGCGGCGTTGCGCGCGATCCGTGCGGTGGCGCTGGTGTTCGAC
GTCATCACCTTCCCCGTACACCTCGTGATGCAGAGGCCCTGGAGGAAGAGGGCCCTCTCC
AGGAGGATCAAGGCTCGGATAGTGGAGTCTTCGGACGTGAGCGTCACGGTGAGGTCGGTG
TCGGCGCCCTGCGAGCTGCATCAGAGACTGGTGAGGGACGGTGTCACCACCATGGAGGCG
ATGTTGAGGGCGGCGGCCGGCCGTTGGGGCGGAGCACCCTGTCTGGGGACCAGGGCCGTG
CTGAGCGAGGAGGACGAGCCGCAAAACAACGGACGAGTCTTCAAGAAGTACAAGATGGGT
TCGTACTCGTGGCGGTCGTACGTGCAGTGCGCGCGGGAGGCTCGTCAGTTCGGTTCTGGT
CTGCGGGCCCTGGGCTGCTCCCCGCGGACCAACCTCGCCATGTTCGCGGAGACACGCGCC
GAATGGATGATCGCCGCTCACGGCGCCTTCACACAGAGTATACCCGTGGTGACCATATAC
GCGACCCTGGGCGACGACGCCATCGCTCACGGCATCAACGAGACGCAGGTGTCCACCGTC
ATCACCACACACGACCTGCTGCCCAAGTTCCGCAAGATACTGGCCAAGACGCCGCGCGTG
CGCACCATCATATACATGGAGGACCAGCTTAAGGAGACCCCCAAGGACGGTTACAAGGAA
GGCATCAAGATCGTTGGCTACAAGGAGGTCGTGGAGATGGGCAAGCAAGCCAAGAACGAG
CCCGTGCCGCCTGCTCCTCACGACACGGCCATCATAATGTACACGTCGGGCTCCACCGGC
GTCCCCAAGGGCGTGGTGCTCTCTCACCGCAACATGGTGGCCACGCTGAAGGCTTTCGCG
GACGCCGTCCCCATACACGAGGGCGACGTGCTCATGGGCTTCCTGCCGCTGGCGCACGTC
TTCGAACTCCTGGCTGAAAGCCTCTGCGTCATCGGAGTATTCTCCCCCTCCGCCTCTATA
CCGCGGAGTATCTCTCGTCGGCGTAAAATTAAATTTTGTGAAATGGCAGCGAGAATAATA
AGAAAAATCATCCCCGCGGGCCGGGCTGGTTCCGCTCAATACAGCACGGGGGTCCGTAAG
GTGACACTCATCCCTGGACACGGGATCGGCCCCGAGATCACGGTAGCTGTACAGAAAATA
TTCGAAGCCGCCAAAGTACCCATTGAATGGGACGAGGTGGACGTGACAGCTGTTAGAGGG
GAGATCGTCATAGGAGGGGAGAGTGTGGCGGAGGGATACTACGCCCAGGAGGAAAAGACG
AGGGCCGAGTTCATAGACGACGGAGGGCGGCGGTGGTTCAGGTCGGGAGACGTGGCCGAG
CTGCATCACGACGGATGCATCAAGATCATCGATCGCAAGAAGGACCTGGTGAAGCTGCAG
GCCGGAGAGTACGTGTCGCTGGGGAAGGTGGAGGCCGAGCTGAAGACATGCCCCATCGTG
GAGAACATCTGCGTGTACGGAGACAGCAGCAAGACATACACCGTGGCGCTGCTGGTGCCC
AACCAGAGACATCTGGAGGAACTGGCGCTCAGGATAGGAGTCACGGAGACGGACTTCGAC
AAGCTCTGTCAGAACAGCGAAGTGGAGAAGGCCGTGGTCAAGGAGCTCGCGGAACACGCC
AGGAAATGCGGGCTGGAGAAGTTCGAGGTCCCGGCGGCCGTGAAGCTGTGTGCCGAGGTG
TGGTCCCCGGACATGGGGCTGGTGACGGCCGCCTTCAAGATCAAGAGGAAAGACATCCAG
GAGAGGTACCACGACGACATCAAGCGGATGTACGCGTCGTGA
Protein sequence:
MTFRNNVKVSLPVVRPSPPPPALNTNFVSRRKQRVAFARSDECERTGHELYVTDNRIAIE
YLTENTFEYESVRRKPQVPLLLKLLPPTPRLPLLSQIQIVPENVRQLQRLFTRESVHDGP
DSWWVSAALRAIRAVALVFDVITFPVHLVMQRPWRKRALSRRIKARIVESSDVSVTVRSV
SAPCELHQRLVRDGVTTMEAMLRAAAGRWGGAPCLGTRAVLSEEDEPQNNGRVFKKYKMG
SYSWRSYVQCAREARQFGSGLRALGCSPRTNLAMFAETRAEWMIAAHGAFTQSIPVVTIY
ATLGDDAIAHGINETQVSTVITTHDLLPKFRKILAKTPRVRTIIYMEDQLKETPKDGYKE
GIKIVGYKEVVEMGKQAKNEPVPPAPHDTAIIMYTSGSTGVPKGVVLSHRNMVATLKAFA
DAVPIHEGDVLMGFLPLAHVFELLAESLCVIGVFSPSASIPRSISRRRKIKFCEMAARII
RKIIPAGRAGSAQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWDEVDVTAVRG
EIVIGGESVAEGYYAQEEKTRAEFIDDGGRRWFRSGDVAELHHDGCIKIIDRKKDLVKLQ
AGEYVSLGKVEAELKTCPIVENICVYGDSSKTYTVALLVPNQRHLEELALRIGVTETDFD
KLCQNSEVEKAVVKELAEHARKCGLEKFEVPAAVKLCAEVWSPDMGLVTAAFKIKRKDIQ
ERYHDDIKRMYAS