| New model in OGS2.0 | DPOGS206627 |
|---|---|
| Genomic Position | scaffold7319:+ 5315-8756 |
| See gene structure | |
| CDS Length | 1107 |
| Paired RNAseq reads | 197 |
| Single RNAseq reads | 575 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG7146 (4e-44) |
| Best Human hit | vam6/Vps39-like protein (2e-50) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (7e-93) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC007012 [Tribolium castaneum] (2e-90) |
| GeneOntology terms | GO:0005083 small GTPase regulator activity GO:0005515 protein binding GO:0030897 HOPS complex |
| InterPro families | IPR001180 Citron-like |
| Orthology group | ND |
Nucleotide sequence:
ATGCATGAGGCGTACGAGGTTTCGCATCTTCTCAACGCAACGGTACAGATTGAAGCAATC
GCTGCTTATGATGAAAACTTATTTTTAGGGACGAGGCAGGGTCACTTGCTTATGTACTCA
TTAGCAACTAATAATGGCAATCAAAAGTATGAACTCCAGTTGCTTCGATACTGTAAAAAC
TTTAGCAAAAAACCTATACAACAAATTGAAGTTATTCCAGAGGACAACTTATTACTATGT
CTAACTGATAATGTCCTATCTTCATATGACATAAATGGAGTTAATTTTCCGCTAGTTAAA
ACATTCTCTGAAAGCAAAGGTGCTTCCCTTTTTGCATTAGATAACAAGTCAGCTACCTCA
ATGACGGGTGAATCTAACTCAATAGTACACTTATGTGTTGCTGTTAGGAGGAAGTTGCAA
CTATATTACGGTAAAAATGGAAAGTTCCAGAAACATCTCTTTGATTTCACAATTCCCGAT
GTGCCTAAAGTTATGGCATGGGGGCAACAATATTTGTGTGTTGGTTTTAAAGGGGAATAC
ACCCTATTTGATCTTTCTTCGGGAGATCCTAAAGAACTCTTTCCGACAAGCAGCTCCAAA
TCCCAAGAGCCAACCATTGCCAAATATTCTGCAACATCTTTTCTCCTTGGCCGTAATAAT
ACATCAGTACTAGTGGAAGAAGCTCAAGATATTGAAGTTAAGAACACCATTAAGTGGAAA
GAGGCACCTATAGCTGTGGTTTGGGATGAACCATTTATCCTTGGTCTCCAACAGGATCAA
GTTGTAATACAGACAGTGGAGCCGGCCTTGTTCATACAGACTTTGCCGGATTTAAACAAA
GCAAGACTTATGTATAGATGTAAGCGTGGCCTTATATTCGTGTCGTCAGTGGGTCAAGTG
TGGTGTCTCAGCTCAGTGGACATCACCAAGCAGAGGCAGCAGCTGTTGAAGGACAAACAT
TTCCAGATAGCCATAGATTTAACGGTAATATTTTTTTTTATCATTTACAAATCTCGCCCG
CGTCTTTGTCTTCATACAGCCTTTTTGGTGACACGCGTTATCATAGGTTACATTCGATTT
CTTAGAGATCAGTCAATCACATCCTGA
Protein sequence:
MHEAYEVSHLLNATVQIEAIAAYDENLFLGTRQGHLLMYSLATNNGNQKYELQLLRYCKN
FSKKPIQQIEVIPEDNLLLCLTDNVLSSYDINGVNFPLVKTFSESKGASLFALDNKSATS
MTGESNSIVHLCVAVRRKLQLYYGKNGKFQKHLFDFTIPDVPKVMAWGQQYLCVGFKGEY
TLFDLSSGDPKELFPTSSSKSQEPTIAKYSATSFLLGRNNTSVLVEEAQDIEVKNTIKWK
EAPIAVVWDEPFILGLQQDQVVIQTVEPALFIQTLPDLNKARLMYRCKRGLIFVSSVGQV
WCLSSVDITKQRQQLLKDKHFQIAIDLTVIFFFIIYKSRPRLCLHTAFLVTRVIIGYIRF
LRDQSITS