New model in OGS2.0 | DPOGS204832  |
---|---|
Genomic Position | scaffold4628:- 315-8863 |
See gene structure | |
CDS Length | 2721 |
Paired RNAseq reads   | 765 |
Single RNAseq reads   | 1744 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001572 (0.0) |
Best Drosophila hit   | CG32533 (0.0) |
Best Human hit | probable ATP-dependent RNA helicase DHX34 (0.0) |
Best NR hit (blastp)   | ATP-dependent RNA helicase [Aedes aegypti] (0.0) |
Best NR hit (blastx)   | ATP-dependent RNA helicase [Aedes aegypti] (0.0) |
GeneOntology terms    | GO:0004386 helicase activity GO:0005634 nucleus GO:0004004 ATP-dependent RNA helicase activity GO:0000398 nuclear mRNA splicing, via spliceosome GO:0005524 ATP binding GO:0003676 nucleic acid binding |
InterPro families    | IPR001650 Helicase, C-terminal IPR007502 Helicase-associated domain IPR011709 Domain of unknown function DUF1605 IPR014001 DEAD-like helicase |
Orthology group | MCL11431 |
Nucleotide sequence:
ATGCTAACCCAGTTTGATACTAAAGTTGGCTATCAGATCAGATTCGAGAAAAGCAAGACA
TCAGACACCAAAATATGCTTCATCACTGAAGGTTTGCTTCTGAGGCAGATGTCTTCAGAT
AATCTGCCCGAGTATGATGTTATTATTCTAGATGAGATACATGAACGTCACCTCATGGGT
GATTTCCTACTGGGTGTACTTAAATGCCTCATCCACACAAGAACTGATATTAAACTCGTT
CTCATGTCAGCGACTATTAATATAAAACTGTTCCAGGATTACTTTTCAGCCGAATCAGCT
GTAGTTATACAGGTCCCCGGCAGACTCTTTTCGATAGAATTAAATTACAAACCTATACTC
ATAGAAGAAAAACCTTCTAGGCACGATAAATTAGATCCTCAGCCATACGTACAGATTATG
CAGTTGATAGATAGCAAATATCCAAAGGAGGAAAGGGGTGACCTGTTGATATTTATGTCC
GGTGTACAAGAAATAACGACAATATGCGACGCGGCGCAGCAATACGCGGAGAAAACAAAG
AGTTGGATCGTACTTCCCTTGCACAGTGCGTTGTCGCTTAGTGAACAAGATAAGGTGTTC
GACTATCCGCCAGATGGCGTTAGGAAATGTATAGTCTCAACGAACATAGCCGAAACATCT
GTCACCATAGATGGCATAAGATTTGTCATTGACTCCGGGAAGGTCAAAGAGATGAGTTAT
GATTCGTCAACAAAAATGCAAAGGTTGAAAGAATTCTGGATTTCAAAGGCAAGCGCTGAT
CAGAGGAAGGGGAGAGCGGGCAGGACTGGTCCAGGTGTTTGTTACAGAGTTTATTCAGAG
CAGCAGTTCACCGAAATGGAACCGTACAGCACCCCAGAGGTGTCCCGGGTGCCGATTACC
TCACTGTTACTGTTGATGACGTCACTGGGCGTTAATGACGTCAGACGGTTCCCCTTCATC
GATGCCCCAAGTGATGCCGCTATCGAAGACGCTCTGTTAGAGTTGAAGCAGCACTTAATT
TATGCGTCTAATGAGAAGCTGACACCGTTAGGTCGGTGTATATCTTCGTTACCTTTGGAG
GTGTCCTTGGCTAAGTCGCTGGTGATAAGTGCTACTCTCCCACCGCAGTGCCAGTACGCT
TCACTAGTGCTGGCCGGAGCCCTGGGACTCCGAGGCGTACTCACGAGAAGAGGAAGGGAC
CTTGATTGTGAGAACGCTCGTAAGCCAGACGAATCCGACCACGGCGATCCAATAACCCTC
CTGTGTTTGTACTGTTCGTGGTTGAGGGAGAAGTCTTCGGGGGGTGGTCGGGCGTGGTGC
AGGAGACGAGGCATCGAGGAACAGAGGCTGTATGAACTCACCAAACTGACCGCACAGCTC
AGATCATTGCTACAGGATAACAATCTATTGGATTCTCCGGAGCCTGAGACGATGTCATCA
TCAGAGCGAGCGATGAGACATGGACAATTGAAACAGCTCAAAGATCTTAGAAGACAGTAC
AAACAGAAGGCTGCCGAGGATGCGAAGCGTCGTAAGCGTCTCAAGGTCGACACGTGGGAG
ATAGGTGATGAGGACGATGACGTCATCGATGTGAGAGACATAGAGTTCAGGATGACCAAT
GACGCTGCCAGGATACGAGCACTGATCAGCGGAGCAAGTACTAGCGGCGGACAGGATCTT
GTTATGTTGAAGATCGTGTTATGCAGAGCTTTGTATCCGCAAATAGCTATCGCTGACGAA
TTCAATTACTGCAAGACAGAGCAGCTATATCACACCTGGAGCAAACCCTCCGTGTACCTT
CACCCGACTTCATACTTCGGGAGATACCCTAAAGCACTACAGCTGACCGAGACGGACATA
CAGACGGCGCCGGGGTATAAGAGCAAGCTGCCGCTGTCAAATAAACACCAACTGTTGTGT
TACTTGTCTCTGCTTGAAACCACGAAGCCCTACATAGTTAACTCTATGCGTATGCCGGCA
GCGCAGACGTTGCTGCTTCTAGCACATTCCATAGACACAAACACAGGATTCACAAGGATA
GTTTGTGACTCCTGGCTCCTCCTGGAATTCCCTTTCCCTGAATCGGGATGCCAATTACTA
TATAGAGCATCCACGATAAGAAAGAAATGGGACGAACTGATTAATAGAAAACTTGCAGAT
GCAAACCCCAACAGGTCGGTGGAGGAGGAGCTCCAGAAGTCAAATCAAATGGGTTACGAG
GAACTACAGCATGAGCTATCGTGTGAGATAAGTAAATATATGAACTGTGATGTGTCTTAT
ACCCTCAAGAGGTTACTGCCGGGGGACTTGAAGGTACTGTACGATGGTGACACCCAGACG
ACTGTATCTCCTAACCCATTCGATCAAACCTATGTCTGCCGACCCCATGATAAGAAGGGC
GGGGTTTATGTCACTGATAATATTGTATACAATTGTATTGTAGATTCAGAGTGGAGCTAC
GATAGTTATCAGGAAACCTACAGCATACCGTGGGTTTGTCCGCAGTGCGAGGTGACTGTC
TGTCTGTCACCTTTAGAAAGATTACAGCATAGGGTATTCACTTGCTCATCAAAAACTGAG
AAGAAACTAGAGAAGACGGTTACACGCATGAACAGGCCCAATACTAAAGAATTTATTTGT
GATGTTTGCAATACAACGATGTCCCTAACGCCCGTTGAAATATTGAAACATAAGAAGGCT
TGTAAAATAAAGGAGCAATGA
Protein sequence:
MLTQFDTKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSDNLPEYDVIILDEIHERHLMG
DFLLGVLKCLIHTRTDIKLVLMSATINIKLFQDYFSAESAVVIQVPGRLFSIELNYKPIL
IEEKPSRHDKLDPQPYVQIMQLIDSKYPKEERGDLLIFMSGVQEITTICDAAQQYAEKTK
SWIVLPLHSALSLSEQDKVFDYPPDGVRKCIVSTNIAETSVTIDGIRFVIDSGKVKEMSY
DSSTKMQRLKEFWISKASADQRKGRAGRTGPGVCYRVYSEQQFTEMEPYSTPEVSRVPIT
SLLLLMTSLGVNDVRRFPFIDAPSDAAIEDALLELKQHLIYASNEKLTPLGRCISSLPLE
VSLAKSLVISATLPPQCQYASLVLAGALGLRGVLTRRGRDLDCENARKPDESDHGDPITL
LCLYCSWLREKSSGGGRAWCRRRGIEEQRLYELTKLTAQLRSLLQDNNLLDSPEPETMSS
SERAMRHGQLKQLKDLRRQYKQKAAEDAKRRKRLKVDTWEIGDEDDDVIDVRDIEFRMTN
DAARIRALISGASTSGGQDLVMLKIVLCRALYPQIAIADEFNYCKTEQLYHTWSKPSVYL
HPTSYFGRYPKALQLTETDIQTAPGYKSKLPLSNKHQLLCYLSLLETTKPYIVNSMRMPA
AQTLLLLAHSIDTNTGFTRIVCDSWLLLEFPFPESGCQLLYRASTIRKKWDELINRKLAD
ANPNRSVEEELQKSNQMGYEELQHELSCEISKYMNCDVSYTLKRLLPGDLKVLYDGDTQT
TVSPNPFDQTYVCRPHDKKGGVYVTDNIVYNCIVDSEWSYDSYQETYSIPWVCPQCEVTV
CLSPLERLQHRVFTCSSKTEKKLEKTVTRMNRPNTKEFICDVCNTTMSLTPVEILKHKKA
CKIKEQ