| New model in OGS2.0 | DPOGS200823 |
|---|---|
| Genomic Position | scaffold354:- 44343-51911 |
| See gene structure | |
| CDS Length | 2619 |
| Paired RNAseq reads | 1194 |
| Single RNAseq reads | 3008 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009877 (0.0) |
| Best Drosophila hit | CG5899, isoform A (0.0) |
| Best Human hit | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform b (9e-166) |
| Best NR hit (blastp) | PREDICTED: similar to helicase [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to helicase [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0004003 ATP-dependent DNA helicase activity GO:0003677 DNA binding GO:0005524 ATP binding |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR000330 SNF2-related IPR009060 UBA-like |
| Orthology group | MCL14221 |
Nucleotide sequence:
ATGTCTGAAAGTACGAGTCCTAGTGTATTAAGTTATCTAAGACAATATAGATTTCAAAAG
AAACCTACCCCAGGTTCTAGCGGGGTTGTAACTGTTTCAGCATCATCTTCTGGCTCTCCA
TCACAAATTCGTATGCCAGCTCCAAGCACAGCAAATAGAAATGGACCTATAGTATATAAA
AGAATTAGAATCCAAGATTCTGATTCAGATGACAACCCATCACCAGCTAAGAAGGTTGTG
GTAGAACTAACAACAGCAGTCAAAGAAAGAAGGTTCCGGAACATGCTAGAAATGTTTCCT
GATATTTCTCCTCTATTTGTAAAGAACACTTTGGTGAAACATGGTTGGAATGAGGAGAGA
TCTCGTGATGAGCTCCTCAAACACGATCCAGAGAGTAATGACAAAGCTTCATCATCCACA
TTCTTTGCATCACGTCCTGGATTTTCCGGACAATTACCGAGAACCAATGGTATGATAGTC
AGAGTTACCAGCGGGCCTAGTGTGGGAGTTAGAAAACCCTTAGCTGCTAAAGGAGGAAGG
GCGAGACGAGGTAGCAGCGGCAGTGAAGATGACGACTATGGAGTTAGAAAGGGCAAAGAT
GACAGAGTATATGACAGTGAGGACTCCGATAATGAGGTGACAGATGATCTTGTAGGTGAT
AAACGAAAGGTGTTTGAGTTCCTTAACACAAGCAGCATGAATGAATTGTCTTTACTAAGC
GGCTGTTCCCAGAAGAAGGCGGAGGCGATCATGGCCCAAAGACCGTTTAAAGGCTGGGTG
GATATGGTGGAAAAATTCAATAACAACAAGATGTTGAGCACAGATCTGTTGAATTCAACA
CAAGAGTTGCTAAGCACTAGGAACAATATTCAGCGTTTGATGAAGAAGTGTGTGGGGCTC
GCCCAGCAGTTAGAGTCCGCAGTGGCAGCTGGAGCTGGGAGGTTGAAGCAACCTGGAATA
CTAGACTCCAGTCTGAAGTTGGCACCTTATCAGCTGGTAGGTTTGAACTGGCTGGCTGTA
CTTCACAAACAGGGAGTATCAGGTATATTGGCTGATGAAATGGGACTTGGGAAAACGGTA
CAAGTCATAGCATTTCTTGCGCACTTGAAGGAAACGGGACAGGCTAGGGGAACGCATCTG
ATTGTTGTACCTGCAAGTACTTTAGATAATTGGAGTAGTGAGCTGTCGCGGTGGTGTCCT
TCACTCAGGGTCAGCAAGTACTATGGAAATCCTGAAGAGAGGAGACAGCTCAGGATAGAG
TACTCCAGAGGACTGGATCAGATAGACATTGTACTTACCACTTACACAATGGTGTCCAGC
TGTCCCGAGGAACGTAAAATGTTTCGTATAACACCAATGCACTATGTGGTCTACGACGAG
GCTCACATGCTCAAAAACATGTCCACACAAAGATATGATAATTTGCTTAAAATAAAGTCG
AAGCATCGTCTATTGCTAACGGGGACACCGCTTCAGAATAATCTGGTGGAGTTGATGTCT
CTACTGTGCTTCGTCATGCCGCACATGTTCTCTGGGAACACCGATGACCTCAAGAATCTG
TTCCAGAAGAACGCGAAAGCAAAAACCACAAAAAAGACAAATGGCAACACCGATGACGAA
GTGCCGGCGTTCGAGCAAAGTCAGATCACTCAAGCTAAGAGGATTATGAAACCGTTTGTT
CTGCGTCGGCTAAAGCGCGACGTGTTACAAGACCTACCTCAGAAGACGAACCACACAGAA
CTGTGCCCTATGTCGGAGAAACAACAGAGGCAGTACAAAGAGCTCATAGCTGGCTTTGCG
GCTAAAGATGGAACAATCCACGCAACGACGGAACAAAGCGGCATATCGATGATGATGGAC
ATGCGTAAACTGGCCAACCATCCCCTACTGCTGCGTTACCACTACGACCAACACACTACC
CGCAAGATGGCCGCCCGCCTGGCCAGGGATCCCGACTACAAGGAGAAGAACGAACAATAT
CTGTTCGATGATCTCATGTGCATGTCCGACTTCCAAATACATCAACTCACCCAACAGTAC
TCTTGTATTAGACAATATGCAGTGCCGGATACTTTAATAGAAGATTCCGGCAAGTTCCAA
AAGTTAGACTCAATGCTGCCACAATTGCAAGCTGAAGGTCATCGAGTGCTCATCTTCAGT
CAGTTCACGATGATGTTGGATGTCATCGAGCCTTACCTTAGAATGAGAAACTACAGGTAC
CTCCGGCTAGATGGCAGCACTGCAGTCAATGAAAGACAAGACCTGATTGATCAGTACAAT
ACCGAGGATATATTTGTGTTCCTGTTGTCCACGAAGGCGGGCGGACTGGGCATCAATCTG
ACCGCAGCGGACACTGTCATTATACACGATATAGACTTTAATCCATATAACGACAAGCAG
GCAGAAGACAGATGTCACAGGATGGGTCAGACCCGCCCGGTCACTATATACCGTTTGCTG
AGCGCTGGTACCATTGAGGAAGGTATCTATCAGGTTGCTCAGGAAAAACTTAACTTGGAG
AAACACGTCACTGGCGCCGATGAAAACGAATCGACAGAGCAAAAGAATGTCGTCCGCCTG
TTGTCCGCGGCGTTGGGTCTGACGTCACCGAACAAATGA
Protein sequence:
MSESTSPSVLSYLRQYRFQKKPTPGSSGVVTVSASSSGSPSQIRMPAPSTANRNGPIVYK
RIRIQDSDSDDNPSPAKKVVVELTTAVKERRFRNMLEMFPDISPLFVKNTLVKHGWNEER
SRDELLKHDPESNDKASSSTFFASRPGFSGQLPRTNGMIVRVTSGPSVGVRKPLAAKGGR
ARRGSSGSEDDDYGVRKGKDDRVYDSEDSDNEVTDDLVGDKRKVFEFLNTSSMNELSLLS
GCSQKKAEAIMAQRPFKGWVDMVEKFNNNKMLSTDLLNSTQELLSTRNNIQRLMKKCVGL
AQQLESAVAAGAGRLKQPGILDSSLKLAPYQLVGLNWLAVLHKQGVSGILADEMGLGKTV
QVIAFLAHLKETGQARGTHLIVVPASTLDNWSSELSRWCPSLRVSKYYGNPEERRQLRIE
YSRGLDQIDIVLTTYTMVSSCPEERKMFRITPMHYVVYDEAHMLKNMSTQRYDNLLKIKS
KHRLLLTGTPLQNNLVELMSLLCFVMPHMFSGNTDDLKNLFQKNAKAKTTKKTNGNTDDE
VPAFEQSQITQAKRIMKPFVLRRLKRDVLQDLPQKTNHTELCPMSEKQQRQYKELIAGFA
AKDGTIHATTEQSGISMMMDMRKLANHPLLLRYHYDQHTTRKMAARLARDPDYKEKNEQY
LFDDLMCMSDFQIHQLTQQYSCIRQYAVPDTLIEDSGKFQKLDSMLPQLQAEGHRVLIFS
QFTMMLDVIEPYLRMRNYRYLRLDGSTAVNERQDLIDQYNTEDIFVFLLSTKAGGLGINL
TAADTVIIHDIDFNPYNDKQAEDRCHRMGQTRPVTIYRLLSAGTIEEGIYQVAQEKLNLE
KHVTGADENESTEQKNVVRLLSAALGLTSPNK