| New model in OGS2.0 | DPOGS204430 |
|---|---|
| Genomic Position | scaffold1355:- 9675-14830 |
| See gene structure | |
| CDS Length | 2115 |
| Paired RNAseq reads | 1451 |
| Single RNAseq reads | 3694 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007727 (1e-09) |
| Best Drosophila hit | nicastrin, isoform C (1e-81) |
| Best Human hit | nicastrin precursor (7e-59) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP003323-PA [Tribolium castaneum] (6e-107) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP003323-PA [Tribolium castaneum] (1e-93) |
| GeneOntology terms | GO:0007219 Notch signaling pathway GO:0005886 plasma membrane GO:0006509 membrane protein ectodomain proteolysis GO:0016021 integral to membrane GO:0007010 cytoskeleton organization GO:0007220 Notch receptor processing GO:0016485 protein processing GO:0045314 regulation of compound eye photoreceptor development GO:0008594 photoreceptor cell morphogenesis GO:0045463 R8 cell development GO:0046331 lateral inhibition |
| InterPro families | IPR008710 Nicastrin |
| Orthology group | MCL14689 |
Nucleotide sequence:
ATGTGGTTTTTAGTAATATTGCTATCAAAAGATTCTGCCTGTGAAAGGCTTCATGAACAG
ATTTATTCATCTATTGAAGGTGGTGCTGCCTGTTTCAGACGATTGAATGGTACTCACCAA
GCAGGATGTACATCCCCCTTGAATGGTGCAGTGGGTGCAGTTCATATGATTTCCAATATA
TCAGATGCCCAATGGATGATATACAACTCAAGTGCTGGTCCGTATGTGGCCGTTGTCAAT
ACAATAGTTTTCAATGAGGTCATAGAACTTTTTATGCAGGAACCATCAAATGTGGCTGGT
ATTTTATTATATGAAAATGCTACTGAAAGACCTGAATTCTTCAGTCCGGAAACTCAATGT
CCGAATGAAAACTCAGCTGGCTCTGATGGCCAGTGTGCTGGTGATGTTGTATGGAATGAG
AATGGTTCTGGTCTTTTGAGGAGAGATATACCTTTTCCAATATTCTTTCTGCCGAGTTCT
AGAATCCAAGAAATTGATAAAATTATACAATGTCATGATAGATATAATCTTGATAAGGAT
AATCAAAAAGGCAGGCCGTTGTGTTCCTTACAATTAAGTTCATTTATGTATGCTGCTGTT
AATACCGCTGTGTGTTTAAGGAGGTCAGCAACTTCAATATTTGGAATAGCTATTAAGATG
TGTGACCCACTTGGAGATTACAATGTATACTATTCTTTATTCCCACGGCCAAAGGAAACA
GCAAAAGAAAAGAAACAGGTAATTTTAGTGACAGCAAGAATGGATTCAGCATCACTCTTT
GATGGTGTGGCACCTGGAGCAGCTAGTGCAGTTGTCGGATTGGTAACACTAATAACTACA
GCGGCCACACTGTCACAAATGATACCTCAAACTGAAGCCGCTTCATATAATAAAAATGTT
CTCTTCACATTGTTTAATGGCGAGTCATATGATTATATTGGATCTCAGAGGGTGGCGTAC
GATATATCTCAGGGGGTGTGGCCGCCGTTATCTCCCATCACTTCCAAGGATATCAACCTA
CATGTGGAATTGGGACAATTAGGTGGCTCCTTGAATTTGTTCAAAGACAACCCCAATTGG
CCGCTGTACGCGTACGCGCCTTATACATATACTATACCGCCTCAAGTTACAGAGTTTCTT
GCTGAGATGTCTTCATACTCTCAGACCAATAATATGACCATCGAATCAGAGTTTTCTATA
AACATGCCACCATCTTCCCTACATTCGTTTAGGAAAATTCTTTCCAATGCGACTGAGAGC
GGGGAACTACCGGAGATATTGTTAGTCGACCACTTAGGGAAGTTTACGAATAAATACTAT
GAATCGGCATTAGATGACTATGATAGCATTGGTTATTCGTACCACAATATTAGCATCAGT
AATGATGGAAAATTTATACCAACGGACGATTTAATAGCGAACGGCACTATGTCAGAGAAT
GAGGCGCAAGTTAAGATAGCTCGTGTGTCAACATCACTTGCACACACGTTGTACCAACAG
ATCGTTGGAACCGCGTACGCTGGAAATATTTCATCATCCGCACATTTGGTGGACGAAATG
CTGTACTGTTTCCTCCGAAGCCAGGCTTGCAGGTTGTTGGTGGCTGCGGACTACTACAGT
AACGAGGACACGCCCCCTGACGATAGGCCCGCGCCCCTGTATGTGGGGGTCGCTGCTCTG
TCCACACCAGCCGCGCTGTACTCCGGCCATCTCCTGGCATTGCTCACGGGAACCCACATA
CAAGTCAATAGGACCGCCTGCGATAACATCGGCACTCCGGGCTTCTCATATTACTATCTT
CGAGGTTGGAATCAAAGTGGTATTTGTATACAAACAACAATGAACTTTAGTCAAGCTATT
AGTCCAGCGTTTATTAAACCAGATTATAACATAACATCCGGGGAGTTCTCTACATGGACG
GAGTCTGTGTGGCTTGGTCTGTGGGCGCGTGTGTTTGTTCGTGCAGCTGGTGTGGGCGCC
CGTGTGGCGGCCGCGGCCGGAGCCTTCACAACCATACTAGCGGCCGTCACCACCTACTGG
CTGCAAAGACACGCCAGTGTTATATTCCTGACGCCTGTCGCGGATAATGGGGTGATCAGA
AGTGTAAATTGTTAA
Protein sequence:
MWFLVILLSKDSACERLHEQIYSSIEGGAACFRRLNGTHQAGCTSPLNGAVGAVHMISNI
SDAQWMIYNSSAGPYVAVVNTIVFNEVIELFMQEPSNVAGILLYENATERPEFFSPETQC
PNENSAGSDGQCAGDVVWNENGSGLLRRDIPFPIFFLPSSRIQEIDKIIQCHDRYNLDKD
NQKGRPLCSLQLSSFMYAAVNTAVCLRRSATSIFGIAIKMCDPLGDYNVYYSLFPRPKET
AKEKKQVILVTARMDSASLFDGVAPGAASAVVGLVTLITTAATLSQMIPQTEAASYNKNV
LFTLFNGESYDYIGSQRVAYDISQGVWPPLSPITSKDINLHVELGQLGGSLNLFKDNPNW
PLYAYAPYTYTIPPQVTEFLAEMSSYSQTNNMTIESEFSINMPPSSLHSFRKILSNATES
GELPEILLVDHLGKFTNKYYESALDDYDSIGYSYHNISISNDGKFIPTDDLIANGTMSEN
EAQVKIARVSTSLAHTLYQQIVGTAYAGNISSSAHLVDEMLYCFLRSQACRLLVAADYYS
NEDTPPDDRPAPLYVGVAALSTPAALYSGHLLALLTGTHIQVNRTACDNIGTPGFSYYYL
RGWNQSGICIQTTMNFSQAISPAFIKPDYNITSGEFSTWTESVWLGLWARVFVRAAGVGA
RVAAAAGAFTTILAAVTTYWLQRHASVIFLTPVADNGVIRSVNC