| New model in OGS2.0 | DPOGS204459 |
|---|---|
| Genomic Position | scaffold1355:+ 52140-55590 |
| See gene structure | |
| CDS Length | 1320 |
| Paired RNAseq reads | 656 |
| Single RNAseq reads | 1895 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007802 (5e-129) |
| Best Drosophila hit | reversed polarity (2e-26) |
| Best Human hit | homeobox protein ARX (6e-21) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (9e-58) |
| Best NR hit (blastx) | restnal homeobox protein Rx1, putative [Pediculus humanus corporis] (7e-28) |
| GeneOntology terms | GO:0005634 nucleus GO:0003702 RNA polymerase II transcription factor activity GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0010001 glial cell differentiation GO:0043565 sequence-specific DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity |
| InterPro families | IPR001356 Homeobox IPR012287 Homeodomain-related IPR017970 Homeobox, conserved site IPR009057 Homeodomain-like |
| Orthology group | MCL18493 |
Nucleotide sequence:
ATGAACTTTAGTAATAATGATGTGGGCGTTCGCACCCTACAACAGTATGGAAAAATACAT
CTCGAATATGTTTGTGGGAATCCCGCATGTGAATCGGGCTCGCGGAGCCCGAGGTCCGAG
GCGGAGAGACGGCGAGGCAGGACGGAGTCCAGCGAGGTTGCCGCTGAGGTAGCGGGTAGT
GCACCCGCCGCCGACGGCTACATGTACGTGTGCGGGGAAAGCGGCGCTGGGCCGCGGTAC
GAGTGCGCCTTCGACGGTGGCATGGAACAGCCCTTCGACGAGCACATGTTCAGCGAGTTT
GGCAAGGAGAGACAGGTGCAGGTTGTTGTCGGAGCCAGCGGGGAACTGCAGTACCGTGAC
GAGCTGCCGGTGTATGCAACGGCTGAACAAAAACGGAAGGACGAACCGCTCCTGCTGCAG
GCGGTAGAGGTTCAGCCTTCCCAGCACTCCCAGCATGTCCCAACAACTACCACAACCACG
ACAACTTCAAAGAAAAGCGACAAAAAGAAAAGTGACAATAACGGCATTAAAAAGAAAAAA
ACGAGAACTACTTTTACTGCCTATCAGTTGGAAGAATTGGAAAGAGCCTTTGAACGTGCT
CCATATCCTGATGTGTTCGCCCGAGAGGAACTAGCTCTGAAGTTGAATTTATCCGAATCA
AGAGTTCAGGTTTGGTTTCAAAACAGAAGAGCGAAATGGCGTAAGCGTGAACCACCAAGA
AAGACAGGATACATAGGATCCAGCTCACCGAGTTCTACCACATTAGGTGGTGGCTTTTCG
GGTATCGGAGGCAACTTGCCAGCATTCCCTCAAAACGGCTTACCAGCACCTTCAGATTCT
TGGTCCTACCAACACTCGTACGAACTGTCATCACATCATTTACTGTCTTCGGGCAGTAGT
GGTTATCCCGCTTTCAACACGCAACCGGCTTATTCTTATACCACAGTGCTGAACGGACAT
GACGGACAAATGTTCGCGCCACGGCATTCATACGAGTACGGAGAGGGCAGCCCGCCCCCG
CTAGGCGTACGTGACTATCCCATGATTGCTTCACACTCCCCGCAGATGGAAACCCACGGG
CACGAAGACAAATTAGAATACCGTGGCCATGAACACGAAGACAAATATTCAGCGTGTGCC
TTACAAGAGGAACCGCCGCGGTACACCTCCCCACCCGAAGATTATGACAAATGTAATATG
GTGCCTCATGACAAACATTACGAAATTGATCGCCACTCTGAACTAGCACAGCCTGTAGTA
GTCAAAATGGAACCCAGCCCCGGCCAAGCATACACGTCACTGCCCCCTTTTTTGAATTGA
Protein sequence:
MNFSNNDVGVRTLQQYGKIHLEYVCGNPACESGSRSPRSEAERRRGRTESSEVAAEVAGS
APAADGYMYVCGESGAGPRYECAFDGGMEQPFDEHMFSEFGKERQVQVVVGASGELQYRD
ELPVYATAEQKRKDEPLLLQAVEVQPSQHSQHVPTTTTTTTTSKKSDKKKSDNNGIKKKK
TRTTFTAYQLEELERAFERAPYPDVFAREELALKLNLSESRVQVWFQNRRAKWRKREPPR
KTGYIGSSSPSSTTLGGGFSGIGGNLPAFPQNGLPAPSDSWSYQHSYELSSHHLLSSGSS
GYPAFNTQPAYSYTTVLNGHDGQMFAPRHSYEYGEGSPPPLGVRDYPMIASHSPQMETHG
HEDKLEYRGHEHEDKYSACALQEEPPRYTSPPEDYDKCNMVPHDKHYEIDRHSELAQPVV
VKMEPSPGQAYTSLPPFLN