New model in OGS2.0 | DPOGS201907  |
---|---|
Genomic Position | scaffold1677:+ 82117-82980 |
See gene structure | |
CDS Length | 864 |
Paired RNAseq reads   | 275 |
Single RNAseq reads   | 631 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006083 (5e-104) |
Best Drosophila hit   | CG31549 (6e-11) |
Best Human hit | carbonyl reductase [NADPH] 3 (4e-38) |
Best NR hit (blastp)   | unknown [Picea sitchensis] (2e-113) |
Best NR hit (blastx)   | unknown [Picea sitchensis] (4e-111) |
GeneOntology terms    | GO:0000253 3-keto sterol reductase activity GO:0055114 oxidation reduction GO:0016491 oxidoreductase activity GO:0004090 carbonyl reductase (NADPH) activity GO:0042376 phylloquinone catabolic process |
InterPro families    | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain |
Orthology group | MCL40031 |
Nucleotide sequence:
ATGTCGAGAGTTGCTGTAGTTACTGGTTCTAATAAAGGAATTGGTTTTTCGATTGTTAAA
TTACTGTGTCAAAGGTTCGATGGCGTGGTTTATTTGACCTCACGAGACGTAGAAAGAGGA
AAGGAAGCGGTTAAAAAACTTGAAGAATTAGGATTACACCCGAATTTTCATCAACTAGAT
GTGGCGGTCAGAAGTAGCGTGGAAATATTTAAGCATTATTTGGAAGAAAATTATGGAGGC
ATTGACATTCTCATAAATAACGCTGCTGTCGTAGATGCAGGGTTTAAAACCTGTAGCTTT
GATGAAGCGAAGAGAGTTATAGATATTAATTATAGAAGTATTTTAACAATGCATGAACTA
ATTTATCCAATAGTAAGAAACGGTGGAAGGATATTAAATATTTCCAGTGACTGTGGCCAT
CTCTCAAATATCAGGAATAAATTTTGGATCGAAAAACTTTCGAAACAGGATTTAAGTGTA
TCGGATGTAAATGAATTCGTGGAATGGTTTTTAGAATCAAAGAAAAACGGAACTTTCAAC
GTCGATGACATAGCGAACGGAGCCTCGGTCGCTGCGTATAGGGTATCCAAAGTGGCCGTT
AGTGCTGTAACAATGATACATCAGAAAGAATACGACAATAAAAACATTTCGATCAACTCA
ATGCATCCCGGACTAGTCCGTACTGACATGACGGCAGGAGTGGGGTTCTACAATGTGGAC
GAGGCAGCTCAAACTCCAGTGTACATTGTTCTAGACGCACCACAGTCTCTGAAAGGTGCT
TATGTTTGGTTCGACAGAAAAGTTATCGACTGGTATGATTACAACGCTGATTATTATTTT
AAAATGAAAACAATTACGGGATGA
Protein sequence:
MSRVAVVTGSNKGIGFSIVKLLCQRFDGVVYLTSRDVERGKEAVKKLEELGLHPNFHQLD
VAVRSSVEIFKHYLEENYGGIDILINNAAVVDAGFKTCSFDEAKRVIDINYRSILTMHEL
IYPIVRNGGRILNISSDCGHLSNIRNKFWIEKLSKQDLSVSDVNEFVEWFLESKKNGTFN
VDDIANGASVAAYRVSKVAVSAVTMIHQKEYDNKNISINSMHPGLVRTDMTAGVGFYNVD
EAAQTPVYIVLDAPQSLKGAYVWFDRKVIDWYDYNADYYFKMKTITG