| New model in OGS2.0 | DPOGS209413 |
|---|---|
| Genomic Position | scaffold2372:- 14247-17783 |
| See gene structure | |
| CDS Length | 1470 |
| Paired RNAseq reads | 41 |
| Single RNAseq reads | 114 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012601 (5e-53) |
| Best Drosophila hit | cuticular protein 67Fb (4e-16) |
| Best Human hit | ND |
| Best NR hit (blastp) | cuticular protein RR-1 motif 11 [Bombyx mori] (4e-61) |
| Best NR hit (blastx) | cuticular protein RR-1 motif 11 [Bombyx mori] (9e-53) |
| GeneOntology terms | GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | MCL40765 |
Nucleotide sequence:
ATGAACTGGGTATTGTTTGCCGCTCTTACAGTGGCATGTAATGCTGCGAAATTAGACCGT
ACATATTTACCTCCTGCATCAGCTTCAACAGCTGGTGGAAGTCCAGGTTCAATACAAACT
CCGATTGCAAAGTCTGAAATAGAGAATTTGCCACTTGGTAGCTTTGTTAACGAACATGAT
GGGGTTGTCATTGATGTTGGCGCTGCTGGCATAAAAGCAGTGCAATCCGGCTTAGGAGCT
TTAAGAATATCATACGGATCAATGGATTCTAAAGTAGGAGAGGCAGCATTCAGAGGTACA
AACCAGGCTCACGTAGCAAACCCGATTTTGGATTACAACCCCGACCTGTCAGCTTTCAAT
ACGCCGAAGAAACCGATGAGATCTGAAATTCAGGTTACACGTGACCGTGGAGCTAGTATT
GTTAAGTACCACAATGATAACAACGGTGAGCGTTACAGCTATGGCTATGAAACTGATAAT
GGAATAAAAGCTGAGGAGAACGGAGTAGCCATCAATGGTGTTCAAGCTGAGGGTGGATTT
TCCTATGTGGGTGATGATGGGAAAGTGTACAGTGTCGTCTACACCGCCGATGAGGGTGGT
TATCGGCCGATGGGTAATCACCTCCCGACTCCACCACCTATACCGGTGGAGATATTGAGG
GCCTTGGAGCAGAACATGAGAGATGAAGCAGCCGGTATTTTTGAGGATGGCTCATACGAT
GCACGAAAATACAACAATAATGATTATAAGCAAGCTGGGATCAATAATAACTATGATGAC
AGACAAACAAACATGTTTAATGTTCAATCTGGGCTCATCGCTAATATGAATGGAGGATTC
ATGAATAACAACCCAGCAGCTGCTGTCAGACCAAACCCAATAGAATTGTTTGGTACACAA
ACTGAATCTTCGAAATTTGGTGCTGTGAATAAGTTCGGGACAGATTTTAACAAAGGAAGT
GGTTTAGGACAAAACCAGATGAACATAAATGCTGAACTTGGCTCAAGAAATGAATATTCA
CAGAAGCAGAATGCTCAAAATACAATTTCTTCTAATTTTGAGTCCTCGTCTACGAACATG
AACGGCAGTAACAGTTTTACGCCCGCGAAGCCTCTTTCACAACAAGCACTTCAGGAAACA
ATGAATTTAGGACAAGGCCAACTTGATAGCCCAAGGCCAAGTTCATACGATACCTCGATA
TCATCAGTGACTTCTGAGAAGGTATCTTCAGAAGATAAACAAAAGAATAATCAAGATTCG
GGAATAAATTTCTCGATAGAAAGTAATCAACACAAACCAAGCAACAATGGTCAATCATTA
ATGGCACCGATGCAGAGATTACCAACATATAATATTAACAAAAATACAAGTCCACAATAT
ACGCAATCAACGCAACAAAGTAACGAACAGAATCTTTTCGTGGTCCTCAAGGTTCTCTAC
AATCTTCTATTTCTAGTCCTTCTCGTTTAG
Protein sequence:
MNWVLFAALTVACNAAKLDRTYLPPASASTAGGSPGSIQTPIAKSEIENLPLGSFVNEHD
GVVIDVGAAGIKAVQSGLGALRISYGSMDSKVGEAAFRGTNQAHVANPILDYNPDLSAFN
TPKKPMRSEIQVTRDRGASIVKYHNDNNGERYSYGYETDNGIKAEENGVAINGVQAEGGF
SYVGDDGKVYSVVYTADEGGYRPMGNHLPTPPPIPVEILRALEQNMRDEAAGIFEDGSYD
ARKYNNNDYKQAGINNNYDDRQTNMFNVQSGLIANMNGGFMNNNPAAAVRPNPIELFGTQ
TESSKFGAVNKFGTDFNKGSGLGQNQMNINAELGSRNEYSQKQNAQNTISSNFESSSTNM
NGSNSFTPAKPLSQQALQETMNLGQGQLDSPRPSSYDTSISSVTSEKVSSEDKQKNNQDS
GINFSIESNQHKPSNNGQSLMAPMQRLPTYNINKNTSPQYTQSTQQSNEQNLFVVLKVLY
NLLFLVLLV