| New model in OGS2.0 | DPOGS208997 |
|---|---|
| Genomic Position | scaffold434:+ 19640-35699 |
| See gene structure | |
| CDS Length | 4701 |
| Paired RNAseq reads | 4063 |
| Single RNAseq reads | 9661 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012525 (1e-53) |
| Best Drosophila hit | CG34401 (2e-118) |
| Best Human hit | hypothetical protein LOC23053 (1e-103) |
| Best NR hit (blastp) | zinc finger protein swim domain containing protein 4, 5, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG32542-PA [Apis mellifera] (1e-126) |
| GeneOntology terms | GO:0008270 zinc ion binding |
| InterPro families | IPR007527 Zinc finger, SWIM-type |
| Orthology group | MCL14402 |
Nucleotide sequence:
GGGTCTCCTTTACTCGATTGGGAGGAAGGAGATCGTTTCAGTTTCGAAGATTCAGAGCGC
TTCGAAGAAGATTCCTTGTGTAGCTGGACTTCGGAGCCTGAAAGTCTATGTAATAATTGG
CGAGGATGGAGAAGACCCAACCTTCAAAATGCTTTCGGACCACGTTCAACGAAAAAATCC
ATTCAAGAGAAATTGGTGTCATCATTAAGTGAACTGGCAGCCAAATGTGTCGCCAGTCAC
ATACCATTTGAACTTGTGGAACATGTTTATCCACCTGTGCCTGAACAACTTCAGCTCCAG
ATAGCTTTCTGGAGCTTTCCGGATAGTGAAGATGATATCCGACTATATTCCTGTCTGGCA
AATGGCTCAGCTGATGAATTTCAAAGAGGAGAACACTTATATAGAGACAGAGCTGTTAAA
GATGTCCTACAAATCGGTTTTCATCTCTCTGCCACTGTTACGCCCAGTATGACAAGAGCA
CAATTCAATGTAGCGGTGACATTTGATAGACAGAAGATATCATCATGCAACTGTACTTGT
TCATCCTCAGCTCATTGGTGTTCACATATAGTTGCTGTATGCTTATACAGGATACATCTA
CCAACACAAGTATGTCTCAGAGCACCAGTATCAGAATCACTGCAAAGATTGAGAAGAGAT
CAGTTGCAGAAGTTTGCACAATACCTTATATCAGAGTTACCTCGACAAGTTCTACCAACA
GCTCAGAGAATACTGGATGAACTTCTGTCAGCACAGCCTAACCAGATAAACACGACCTGC
GGCGCTCCCGACCCCACCGCGGGGGCTTCGGCCTATGAATACACATCATGGTTCCTCGAT
GAAAAGACTTTGCATAATAACATCAAAAAGATTTTAGTCAAATTCTGTGTGCCTGCACCT
ATAGTTTTTAGGTTTGTGGAATCTCCGCGCGAGATGACCATGTCCAGAAATTGCTCGTGC
AGAACTTCCATCGTAGCGTGTGCTGTGTGGCACGTTGTCGTGTTGTGGCGTTTGGCGGCC
CTAAATCCAGGGTTGGCACCCCATGAGAGAGATACACTTCATGAGCAATTTGCTCAATGG
CATATGAAAGTGCTTGATAAGGTGGCCAAAAACCGTAATAATCACATAAACACGTCTCAC
CCTCGTCATCGTGCGCACCACTCACCATACATCAATGGTATCAGTGAGAATGAAGTATTC
CCAGGATTCCATCCAGCCATGGAGGCGTGCTTCTTGGAATGGGACGACTATCAAATCCAA
GGTGTTACATACACCAAAGATTTGAACCCTCTATATCACAGCCCATTTACAATCTTCAGA
CATACTGACAAAGACAGTGTCCATCAGGTGAATTCCTCAAAGGCTGTACTTAATAACGAG
ATGTCACTCAGTTATCGTCTAACAAATCCTGATCCATCATTACACGGTCATAGGACGGTT
GTTCACCGGACCAGTAGAATTACAGTTGATATGGCCATACCTGGACCATCGAGTCAGCCC
TGCGGTTCCGGCGAGGGTCGGAGTGATGTCGCACGGGACTCTGGCCCTAACGATGGGAAT
CATTCAAGTGTTTCGTCCGAAGGTTTTTGCGAGAATGAGGAGGAGATTCTCCAACAGAGC
GGTGGTGATACAGACTCTCAGGAGTCGACCTCAGCGGGCGGATCCTCTGACGACGCCGTG
AGAAGGGTTTCGCCCGATGATTCAGTCTCCGACGATGAATGCAACCTGTACTACTACGAC
GCGGCTGCTGCTAGGAGAGTCGCTGTAGAGAGCAGTTCCAACAACTCTGTCGTACATTCG
GGTGCCGGTGTCAGTGGATACAACGGCGGTCGCTCGTCAGTAGTGGGGTGGGGTTGCGGG
TGGGAGGTATCATTCGCCCGCGCCGAGGGTCTACACGCACACGGGCACGCTCGAGACGCC
TGCGCACTGGGGGCTCGACTGGCCGCTGAACTACTGGCCAGTCCTCCCGCTCTAGGCGGT
GCTGGAGTGGGTTCTCTATTGAGTGCGGCGGCGGAGGCTCGTCGTGCTCGTCGCCGCCAC
GCTCCCTCTCCACGTCTGTGCGCTGCCAGCCATCGGCTCTCATGTCTCGCATCCGCTACA
CTCGCAAAATGCGCCTTTCTATGTACTGTGCTGGCCGAATTTAACGAACATCATGAATTA
GCTTTCCGCGTTGGATTGTACGCTTTGGAGATGGCCAGACCGCCCGCTAGCACGAAGGCT
TTGGAAGTGAAACTCAATAACCAGGAAACGGAATTGGTTGCTTTGTTAAAGAAATTGCCT
ACCGGCGTCGAACAACTTACATTAGCAAGAGAAAAAGCGGAACAACTACGCGAAGGAGTC
CTGAGAAACCGAGGACCGGCATTGCTGCCAATAGCTTTAGCGAGTTTCCTGTTTGACGTA
CTAGTTTTATCGGCTACGGACAAAGAAAACAAACACCCTGCGAGATTGCCAACGGATGAA
ATGTTAGGATTCGAAGCGGCGGTGGCGGCTCTGGGTTTAAAGGCGAACGTGTCGGAAGCG
GAACACCCTCTATTGTGTGAAGGAACGCGGAGGCAACGAGGAGAGTTAGCATTAACACTA
CTGTCATTCTATAAAGACGACCCGGTTAAATTGGCGCGCATTATGAATAAGCTATTGGAT
CGTGATATCCATCAACTAACGAAGGGCCCGATGGTCAGCATGTACTACACTAATAACCCC
CGTTTGGCGTACCGCGACTCGTCCTACCACGCACATGCCACGCATATGCAACATACCGCA
CCAGTCATGCCACAGGCGTCAGCATGCCAGTTAGTGGGTGACATGGATCGTTTGGCTGTA
TCAGAGGGTGGTCCGTCGCCTCCCGCCATGTCCCATACCATGCACACACACCCTCAACAC
ACTCAACATCCTCCTCATACCCCCCACCCCTCCCACACGCCCCACCCTCATCCTTCTCAC
ACCCCTCACCCTCACCCCTCCCATACCCCTCACTCACAACACTCACAGCATCAGTCACAC
GCGCCACCGCACCAGTCGCTGCCAAGGTTGAAGGACTCGAGGTACAAAGGTAAGCGTGTG
TATCCATCAGTACCGAACCAGCCTTCAGAGGCGTCCGCTCACTTTATGTTTGAGTTGGCC
AAGTCAGTACTATTTAAAGCCGGCGGTTCGTCGAGCACTAGTTTATTCACACAAACCTCA
TGTGCCAGAGAGCACCACGGACCACACAGAGGTCTTCATATGGCTGCATTCCAGCTCGGG
CTTTATGCGCTGGGTTTGCACAACTGTGTCAGTGCTAACTGGTTGAGTCGCACTTATTCG
TCACATGTCAGTTGGATAACCGGCCAGGCAATGGATATAGGAGCACCCGCAATTTTGTTC
CTCATAGACGCTTGGGAAGGACATTTAACACCTCCAGAAGCAGCCGGAATAGCAGACAAG
GCGTCTTCAGGTTGCGATGTACACATGGTACGTGCGGCGGCCGAGCTCGCGTTGTCAGTA
CTCCCTCACGCACACGCGCTCAACTATAATGAGATACAGAGAGCCGTACTTCAGTGTAAG
GAACAAAGCGATGCCATGTTGGAACGAGCATGTCTCACTGTCGAGGCAGCGGCCAAAGGG
GGAGGTGTGTACCCCGAAGTGTTGTATACCGTAGCCCGGTACTGGCACGAGTTATACCTC
CGTCAAGCCGCTGAGGAAGGTGAAACTCCTGAGGAGACGCAGTACCGCGCGCCGCCACCG
CTGGCGGTACCACTACCATACCCGCTGCCATATCCCTTCGCTTACCACTATCCACCACCC
ATATATCAGCTTCAGGTCGCGCATCCACCACAGGTACAATACGGCGGTGCTACAGCGGGT
CACCCCGGACCCCAGTACGCGTTGCCCCCATACATAGTACACGGCATAGTAACATCAACA
CACCCGCCGCCAATGCCGCAACACGTACCTCACGCACCCCATCCACCGCCAATGACCGTT
AATCATCCGGCTCCAATACCACCACCACTGCCGGCAACACACGCAGCGGTACCAACAGCG
GGTGTGAGCGGAGTGGTCACAGTTGGTGCGGTCGGTACCGTCAGCGTGAGCGGAGTCAGC
GGAGTGAACACGGTCAGCGGAGTCAATGTTAACGGGAACGGGGTCGCACCACCCGCATTA
CCTCAAGCACAGCTCAGAAGACTTCTAGCAGCTTATAGAGTGGGAATGTTAGCATTAGAG
ACACAAGCTAGAAGAGTCCACGACGATCGCCCGCAGAATAAGTTTGGAAGAAACCCTCCA
TACGGCGAGCACGTGAAATGGTTGTTGCGTGTATCGAAGCGTCTCGGTGCGCAGTACTTG
CATCAGTTTTGCGTGTGCGCGGTTAATTCGGTGGTGTCACCGTTCGTGTTGTACGAACTC
TGCGTGGAGTCAGCCCATTGGTTGGCTCGAGGTGGACCACACCACCTCGTGATGCAACAC
CTTAGAGGAACACTCGCACCACTAGTACACAAATGTCAACAGATGTACATTCAGTGCATC
CATCAGAAGCTGTATCATCTGACGCCGGTCGAGTATGAGGAGTTTGTTGGGATCGTTTTG
TCAGCTCGCACCGCCTTCCAGTTGACTCCGGAGGGAAACACGCAGTTCAAAGAGTGGCTG
GCATCTTTACGCAGATCGAAGTCCTGCAAGAAGGATCTGTGGACGCAGCTCAACGCGGCC
CTTCAGACTAACGGCAAATGA
Protein sequence:
GSPLLDWEEGDRFSFEDSERFEEDSLCSWTSEPESLCNNWRGWRRPNLQNAFGPRSTKKS
IQEKLVSSLSELAAKCVASHIPFELVEHVYPPVPEQLQLQIAFWSFPDSEDDIRLYSCLA
NGSADEFQRGEHLYRDRAVKDVLQIGFHLSATVTPSMTRAQFNVAVTFDRQKISSCNCTC
SSSAHWCSHIVAVCLYRIHLPTQVCLRAPVSESLQRLRRDQLQKFAQYLISELPRQVLPT
AQRILDELLSAQPNQINTTCGAPDPTAGASAYEYTSWFLDEKTLHNNIKKILVKFCVPAP
IVFRFVESPREMTMSRNCSCRTSIVACAVWHVVVLWRLAALNPGLAPHERDTLHEQFAQW
HMKVLDKVAKNRNNHINTSHPRHRAHHSPYINGISENEVFPGFHPAMEACFLEWDDYQIQ
GVTYTKDLNPLYHSPFTIFRHTDKDSVHQVNSSKAVLNNEMSLSYRLTNPDPSLHGHRTV
VHRTSRITVDMAIPGPSSQPCGSGEGRSDVARDSGPNDGNHSSVSSEGFCENEEEILQQS
GGDTDSQESTSAGGSSDDAVRRVSPDDSVSDDECNLYYYDAAAARRVAVESSSNNSVVHS
GAGVSGYNGGRSSVVGWGCGWEVSFARAEGLHAHGHARDACALGARLAAELLASPPALGG
AGVGSLLSAAAEARRARRRHAPSPRLCAASHRLSCLASATLAKCAFLCTVLAEFNEHHEL
AFRVGLYALEMARPPASTKALEVKLNNQETELVALLKKLPTGVEQLTLAREKAEQLREGV
LRNRGPALLPIALASFLFDVLVLSATDKENKHPARLPTDEMLGFEAAVAALGLKANVSEA
EHPLLCEGTRRQRGELALTLLSFYKDDPVKLARIMNKLLDRDIHQLTKGPMVSMYYTNNP
RLAYRDSSYHAHATHMQHTAPVMPQASACQLVGDMDRLAVSEGGPSPPAMSHTMHTHPQH
TQHPPHTPHPSHTPHPHPSHTPHPHPSHTPHSQHSQHQSHAPPHQSLPRLKDSRYKGKRV
YPSVPNQPSEASAHFMFELAKSVLFKAGGSSSTSLFTQTSCAREHHGPHRGLHMAAFQLG
LYALGLHNCVSANWLSRTYSSHVSWITGQAMDIGAPAILFLIDAWEGHLTPPEAAGIADK
ASSGCDVHMVRAAAELALSVLPHAHALNYNEIQRAVLQCKEQSDAMLERACLTVEAAAKG
GGVYPEVLYTVARYWHELYLRQAAEEGETPEETQYRAPPPLAVPLPYPLPYPFAYHYPPP
IYQLQVAHPPQVQYGGATAGHPGPQYALPPYIVHGIVTSTHPPPMPQHVPHAPHPPPMTV
NHPAPIPPPLPATHAAVPTAGVSGVVTVGAVGTVSVSGVSGVNTVSGVNVNGNGVAPPAL
PQAQLRRLLAAYRVGMLALETQARRVHDDRPQNKFGRNPPYGEHVKWLLRVSKRLGAQYL
HQFCVCAVNSVVSPFVLYELCVESAHWLARGGPHHLVMQHLRGTLAPLVHKCQQMYIQCI
HQKLYHLTPVEYEEFVGIVLSARTAFQLTPEGNTQFKEWLASLRRSKSCKKDLWTQLNAA
LQTNGK