| New model in OGS2.0 | DPOGS214453 |
|---|---|
| Genomic Position | scaffold1775:- 13701-16247 |
| See gene structure | |
| CDS Length | 2127 |
| Paired RNAseq reads | 1318 |
| Single RNAseq reads | 2979 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009620 (0.0) |
| Best Drosophila hit | will die slowly (2e-18) |
| Best Human hit | E3 ubiquitin-protein ligase RFWD2 isoform a (1e-123) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (6e-137) |
| GeneOntology terms | GO:0046872 metal ion binding GO:0008270 zinc ion binding GO:0005654 nucleoplasm GO:0005737 cytoplasm GO:0005515 protein binding GO:0005829 cytosol GO:0004842 ubiquitin-protein ligase activity GO:0016874 ligase activity GO:0016607 nuclear speck GO:0005634 nucleus |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR001841 Zinc finger, RING-type IPR001680 WD40 repeat IPR013083 Zinc finger, RING/FYVE/PHD-type IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR018957 Zinc finger, C3HC4 RING-type IPR017907 Zinc finger, RING-type, conserved site |
| Orthology group | MCL16012 |
Nucleotide sequence:
ATGTCGGGCTCGGCGGCTCTGAACGCGGGCGCCGCGGCTCTGGGTGGGCTTGGCGGCTCG
CTGGAGGACAAAGACTGCGATCTGTTGTGTCCAGTCTGCTTTGAACTCATCGACGAGGCC
TACGTGACTCGTTGCGGACACTCGTTCTGTTACTCCTGCATCGCCAAGTCGGTGGAGCTC
CACCGGCGCTGCCCTAAATGTGGCGCAGCGCTCGCCGGTCGGGACCACTACTTCCCAAAC
TTCCTCCTCAACGAACTAGTTGCTCGCCGGCGGCTACGCTCGCGTCCACCCGCCGTGAGC
GGTCCCGCTGCTGCCGGCTCCCCTTCCAGTGCCGCGGACGCCGACCGACTCCGCGCCCTG
CTGGCCTCGGAGGCGCGCCACCTCGCCCTCCCCGACGTGGAGGGGATGTTGGACGTACTC
ACGCGGAGAAAGCGTCTCCTTGAGGCCGAGTCCGCCGCCGCACATCACCGACTGCTGTAC
GAGTTCCTGGCGCAGCTTCTGAGGCACCGAACACATCAGCTCGACCAACTCACCAGGGAG
GCCGCGCTCGTTAAGAAGGACATGGAGCACGTGTCGGGTGTACTGCGGGAACTGCGGGCG
GGGGCGGCGGGTTTGGGCGGCGACGCGGATCCCAGGGACCTTAGGGATGTACGACCGCGG
CTTGGCGAACTCGGTGATGTACCTCGGAGTCCCCCCAACGAGGAGGAGGAGAGCTTTGCG
TCGGCGACCGGCAGCGGGGGAGGGGGAGACGCGCTCGCCGCGCGGTGGAGGAGACTCGCG
GCACACTTCGATGACTTTGTGCAGTGTTACTTCGCCCACCGCGCAGACGAGTTATATTTC
CCCGGTTCAGGCGCGGCCACTCCAGCCCCGCTCGCCCCCGCCGCCCCTCCGTCCACGGCT
TCTTCCTCCACTGCCCCCCCGTCCTGTCCTCCCCCCGCCGGCTCCTCCAGCACACTGGTG
GATGCGGACGTGGTGCCCCAGCAGGCCTCCGCCCCGGAGACCCGCGCCTCCAGCGCCGCC
GGAGACCAACGCGCGCCCGAGGGTGACCCGCCCCCACCCAGTGCTCCGCCTCCGCCGCCG
ACCAGCGGGGGCTTCGGAGGACTCGAGGCCTTCCGGGAAGACCTCGCCGCGTTCACTCGC
TACCGTTCCCTCCGCCCGCTGGCCACGCTGTCGTACTGCAGCGACGCCATCAACTACTCC
ACGATCGTGTCCACCATCGAGTTCGACAAGGACGAGGAGTTCTTCGCCATCGCCGGAGTC
ACCAAGAGGATCAAGGTGTTCGAGTTCGAGGCAGTGGTGCGGGACGCGGTGGACGTGCAC
TACCCGTGCGCCGAGATGCAGTGCTCCCACAAGATATCGTGCGTGTCCTGGAACGCCTAC
CACAAGAACGTGCTGGCCTCCTCCGACTACGAGGGCACGGTGAGCGTATGGGACGCGGCG
GCCGGCGTGCGCACGCGAGCGCTCCAGGAGCACGACAAGCGCTGCTGGTCGGTGCACTTC
AACCGCGCCGACGTGCGCCTGCTGGCCTCGGGCTCGGACGACGCGCGCGTCAAGCTGTGG
GCGCTGAACGCCGAGCGCTCGGTGGCCACGCTCGAGGCCAAGTTTAACGTGTGCTGCGTC
CGGTTCAACCCGCGCTCCTCCTGCCACCTGGCGTTCGGCTCGGCGGACCACTGCGTGCAC
TACTACGACCTGCGCGCGCCTCGGGCTCCGCTGGCCGTCTTCCGCGACCACCGCAAGGCC
GTCTCGTACGTGAAGTTCGTAGACGCCCGCACGCTGGTGTCGGCGTCCACGGACTCCCAG
CTGAAGCTGTGGCGCGTGGAGTCACCGCGGTGCGTGCGCTCTTTCACCGGACACACCAAC
GAGAAGAACTTCGTGGGTCTGGCCACCGACGGCAAGTACGTGGCGTGCGGCTCGGAGAAC
AACGCGCTGTACGTGTACTACGCGGGTCTCTCGCGGCCGCTGTTGGCTCATCGCTTCGAC
GCCGTGCGCGGGTTCCTGGAGCGAGAGAGGCGAGACGAGGAGCCCGCGGAGTTCGTGTCG
GCCGTCTGCTGGAGGCGAGCCGCGGACAGACCAGCGCTGCTCGCCGCCAACAGTCAGGGA
GCCATTAAGGTGCTGGAGCTGGTGTAG
Protein sequence:
MSGSAALNAGAAALGGLGGSLEDKDCDLLCPVCFELIDEAYVTRCGHSFCYSCIAKSVEL
HRRCPKCGAALAGRDHYFPNFLLNELVARRRLRSRPPAVSGPAAAGSPSSAADADRLRAL
LASEARHLALPDVEGMLDVLTRRKRLLEAESAAAHHRLLYEFLAQLLRHRTHQLDQLTRE
AALVKKDMEHVSGVLRELRAGAAGLGGDADPRDLRDVRPRLGELGDVPRSPPNEEEESFA
SATGSGGGGDALAARWRRLAAHFDDFVQCYFAHRADELYFPGSGAATPAPLAPAAPPSTA
SSSTAPPSCPPPAGSSSTLVDADVVPQQASAPETRASSAAGDQRAPEGDPPPPSAPPPPP
TSGGFGGLEAFREDLAAFTRYRSLRPLATLSYCSDAINYSTIVSTIEFDKDEEFFAIAGV
TKRIKVFEFEAVVRDAVDVHYPCAEMQCSHKISCVSWNAYHKNVLASSDYEGTVSVWDAA
AGVRTRALQEHDKRCWSVHFNRADVRLLASGSDDARVKLWALNAERSVATLEAKFNVCCV
RFNPRSSCHLAFGSADHCVHYYDLRAPRAPLAVFRDHRKAVSYVKFVDARTLVSASTDSQ
LKLWRVESPRCVRSFTGHTNEKNFVGLATDGKYVACGSENNALYVYYAGLSRPLLAHRFD
AVRGFLERERRDEEPAEFVSAVCWRRAADRPALLAANSQGAIKVLELV