New model in OGS2.0 | DPOGS214456  |
---|---|
Genomic Position | scaffold1775:+ 18226-27246 |
See gene structure | |
CDS Length | 4974 |
Paired RNAseq reads   | 5986 |
Single RNAseq reads   | 13812 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009575 (7e-45) |
Best Drosophila hit   | BRWD3 (2e-116) |
Best Human hit | bromodomain and WD repeat-containing protein 1 isoform A (3e-94) |
Best NR hit (blastp)   | PREDICTED: similar to CG31132-PA [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG31132-PA [Apis mellifera] (3e-133) |
GeneOntology terms   | GO:0006911 phagocytosis, engulfment |
InterPro families    | IPR011046 WD40 repeat-like-containing domain IPR001487 Bromodomain IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR018359 Bromodomain, conserved site |
Orthology group | MCL10983 |
Nucleotide sequence:
ATGGAGGATTCCACCGAACCGGTCAATGTCAGTCCTGAACTCTACTTTTTGATAGCGAAA
TTTCTCTCCGGTGGACCTCTGAAAGAGACTGCAAAGACTTTGTTGAAAGAGCTGGCGAGC
GCGGAGGTGCTACCGCAACGTATCGACTGGGAGGGCAACGTTCATTCACAGTCGTACGAT
GAACTGGATTCACAATATTCCGAGATATCATGGAAGCACTTGGTATTCGTATGCGAACGA
GCCCTGCAACTGGCTCGCTACTCGACGGCACCCGCTATCGCTTTGCCAGGACCAGAGAAC
ACGGCACAGATCGCACTACAGAACGGATGCGTCGTCTGGTGTGCCGCGAGCTGGGCGGCG
GCGGCGGACTTGCTGGTCAAGGTGTGGAGCGCGCTGGACGGGCGACTGTGCGCCACGCTG
AGGGGGGCCGGCGCAGAGATCACCGACGTGAGCGCCTCGTGGGACGGCGCTCTCCTGGCG
TGCGGCTCGGTGGAGCGTCTGGTACGCGTGTGGTGCCTGGCGACCGGCGCGCCACGAGCC
GTGCTGCAAGCCCATGCCGGAACCATCACGTCGGTGGCCTGGTCGCCGCCTGCTCACAGG
GAGCTGCGCTGGCTGGCCTCCACAAGCACGGATGGGTCCGTCGCCTTCTGGACGTGCTCC
TTGGACGGACACTTCCTGTCTCAACCCGTCCAGTACGTGGAGCGCCTCCGGCCGGGCGCC
TGTCACATGATCTGCGCCGCTTGGTCTGCGGGTGGCGCCTTCCTGGCGGCGGGCTCGGCC
GACCAGCGTGTCCGCGTGTACGCGCTCGAGGCCGCCGGGCCGCGCCGTGTGCTCGAAATG
GCCGCCCACACGGACGCCGTGGACTCTCTCGCTTGGGCTCACCGTGGCCTACGCTTCGTG
TCCGGCAGCAAGGACGGGACGGCGGCTCTCTGGACTCTACACGCCACACAGTGGAGGCAT
ACCTTATTGCGAGCTCAGCAACCCGAGGAGCCGCGGAAGTTGAAAGTGACGATGGTGTGT
TGGGACGCGAGCGACGAGTTCGTGGTGACCGCCGTGTCGGATCGGACGCTCCGTGTGTGG
TGCTCGCGGCGCGGGGAACAACTTCGCTCGCTGGCGGGACACCGGGACGAGGCCTACGTG
CTGGAAGCTCACCCGCGCCTGCCGGGGGTGCTGCTCTCGGCCGGACACGACGGACAACTG
TTCGTGTGGCACGTGCTGGAAGAGGAGCCGCTGGCGCGGTTCCACAACGAGATCGAGGGT
CAGGGCGAGGGCGCCATCTTCGACGCCAAGTGGGGCGGCGGTGGCGCGACCGTCGCCGCT
GCGGACTCTCATGGACACTTGGTGCTGCTGGGTCTGGGCGCCGGGCACCGCCTGCTGTCG
GAGCTACCTCGCGAGTTGTTCTTTCACACGGATTACCGGCCCCTGGCGCGAGACGCTCTC
GGCGGCGCTCTCGATGAACAAACAGAGCTGCCTCCACACCTGATGCCGCCGCCTTTTCTG
GTGGACGTGGAGGGAGCGCCCCACGCGCCCCGCCATCAGCGGCTCGTACCGGGTCGTGAA
GCGCTACCGCTGGAGCAACTGGTGCCCCGCACGAGACTGGACGCTATGATCGAAGCGCTG
GCCGCCGACCCTCTGTCGGGAGGCGCGGGAGGGGCCGAGGGCGAGGCTGCGGGAGGCCAT
GGAGTGTGGCGAGGGGAAGGCGTGCGCCACACGGCGGGCTCGTGGCAGGGTCTCGACGTG
CCGCTCAGCACTAGGCCTATCGTCCCTCCCCTCGCGCCCTCCGCCAGGGACGCCCTCGAG
AAAGCCAGTGTCGAGTTGAACGCGTACGAGATGTCGTGGTACAGGCGGGAGATGCGGCGC
CGCCCCGTCATGATCAGTACGGCGGGCGAGGGTCCCCGCCGCCGGCCAGGCCGCCGCCCG
CGCCTGCCGCAGCCTCCCCGCACCCGTCCGCCACCGCCCAGGGCTCAAGTTATACCGATC
CGCTTAGACGACGACCCGCCTGAGGTAGCAGACGACAGCGCGGACACGTCCGACGAGTCC
GTCCGCCTGTCCGGCTCCCAGTCGTCCCGCTCGTCTCGGTCCCGCTCGTCCCGTACATCC
CGCTCCTCCCGCTCCTCACGCACGAGACACTCCAGCGCCGAGCTGTGCGACTCGGACAGC
TCACATTCTCCCAGCAAGACGGACAGCTCTTCCAGCTCGCAGTACTCGGACTGGGAGGGA
GGTTCGGCGCTGTCTCCTCCGCAGCGCGCCCGGAGACGCCCGGCTCGCCGGCCCCCCGCC
GCCGCCAAGAGAGTTCCTGCGCCCTGCGCCTCCGCCCCCGACCTCCCGGAGGCCTACCGC
GTCGGCGAATGGCTGACCGCCGTGTCCCCCAGGAAGGCGCCCTACCACCCGCAGATGGGA
GACAGATGTTTGTACTTCCGACTAGGTCACCAGCGGTACTTCGAGGCGGTCGCGGAGAAG
GATCTGTACAAAATAAACAGCAGGGACAAGCCCTGGGAGAGAATGCAGATATATGAGTGC
GAGGCGGTGCAGGTGGTCGGCATCAAGTACGTGATCCGTCCTCCGCGGGTCGCCAGTCTC
AAGCTGGTGCGCGAGAGAGACGCGCGCTCCTTCACCGTCCGCTACCACGACATGCCGGAC
GTCATTGACTTTCTGGTACTAAGGCACCACTACGATGCGGCGGTCGCCAGGCGGTGGGGC
GCCGGGGACAGGTTCCGTTGTATGATCGACGACTCATGGTGGACCGGACAGGTCGTGGAG
AGGATGACGGCTGACGAGGGCGGCGCCGCGGACAGAGGTAGCTCCGACGACAGGGGGGGC
GCCTGGGCCAAGGAGGCTGCCGGTCACTTCCTGTCGCTGAGAGTGAGGTGGGACAACGGG
GAGGTGGAGAGACTGTCACCCTGGGACCTGGAGCCCATAGACCCGGAGAGACTGCCGTCG
GAGCCTGGGGGCGCGGTGCCGGTGCTGCCCCGCGAGCTGGAGGCCGTGTTGCTGAACGAG
TGGCCTCCACAGGCCTGTAGGACCATAGCACAGCATATCTCACAGGTGATGTCTCTGTCC
GTGGCGGAACCGTTCGTGGCGCCGGTGGACCTGCAGCTGTATCCCTCGTACGCCCTCGTG
GTGCCCTACCCCGTGGACCTGGCCACCATCCGGGCGCGCTTCGAGAACCTCTTCTATCGT
CGCGCGGCCGCCGCTCAGTTCGACGCTCGCTGGCTGGCGACCAACGCCGAGCGCTTCAAC
GAGCCTCGCTCGCCCATAGTGAGGCAGGCTAGACTCGTCACCGACCTACTGCTCAATATT
ATACGGTCGTGGGAGCAGGTGGACGTGGTGGCGCAGTACCACGAGCTGGCCGCCTCCTAC
CACTCGGACGACGAAGACGACGACGTAGCTCATAAGAAGCGTCCGACACCCCGCGGCGTG
GTGCCTCACACGGGTCATCAGCGGGCGGGTCCCCCGAGGGCAGCGCCCCCCCGGGATTGG
CGCTCCGCCTGCTCCGCTCTACTGCAAGAGCTCACCGCCAGCGCTGACGCGGAGCCCTTC
AGACACCCCGTATCGTCCGCGCAAGCCCCCGACTACCGCAGTGTCGTGACTCACCCCATG
GACCTGGGCACGGTGAGCCGGCGCCTGTCTCAGGGTCACTACTCGCGCTCCGACCAGCTC
GCCGCCGACGTCAGGCTGGTGTTCGCCAACAGTCGCCTCTACAACACGAACAAACGCAGC
CGGATATATTCTATGACCGTCCGGTTGTCATCGTTGTTTGAGTCGCTGTGGTCGAGACTC
CCGGTCGAGATACGGAGCACCAGGGAGGGGAGGAACAGGGGCAGAGACAGAGATAGAGGC
CGGAGGACCAGGGCGAGGAGGTGTCGGCAGGGGGGAGGGGGGGAACCACTTGATGCAGAG
CCGCGGCCCGGGCCCGCAGTCGTCCGTCCACCCTCGTCCGCGAGCTCGGAGTGCGAGCCG
CTGGCGGCCACGTCTCGGAGGGTTCACGCCTTGAGAGAAACGAGCCACACCTCGAGCCAC
GGCTCTAGCGGCCCGGGCTCGAGCCGACACGACAACGGCTCGGGCTCGAGCACACGAGTC
GAGCGCCCGCCGCCCGCCAGGGCCGACTCCTGGGACAGCGACGTACCGCTCACCTCGCAC
AGGAAAGGGAAAGGAGTCGGGAAGAAGAGCAAGAACACCTCCACCGCCTCCAGCAGCCAG
GCGCCGCCGCAGCTGGCGGAGGAGTGGACGAGCGCGCCGGAGAGCGAGTCACCGACGCAC
ATAGAGGTGGTGGAGGAGGAGCTGGTCGAGGACGAGGTGGAGTTGGAGTACGACGAGAAC
ACGCGCACCAGCGAGGGCCCCAGGGGACCCGCGGGGACGCGTGAGTCCGTCAAGCGGCGG
CCGCGCAGCTCGGGCTCCAGCGACGACAGACCGAACAAACGAAGAGTCCGCGAGCCGTAC
TCGTCGGGCTCGTGCTCCAGCTCAAGTTCGGAGTCGGGCTCGGGCTCCGCCTCGGGCTCC
GGCACCGGCTCGGGCTGGCGCAGCGAACACTCCGCCAGACGAGTGAGATACGAGTCGGAC
CGCTCATACAGACCCAACAACAACTACTCCACCGACGACGACGCGCCTCTACTGCACTAC
AGACAGCGGCAGGGCTCCGGTCCGGGCTCGCGAGGAGGCTCGCTGTCCGGTTCACGGTCG
GGCTCGACGTCGCGGAGGCCTCTCCGACGGCGCGGCTCCCCGCGGCGGTACAACGAAGAT
AGCGAAGACGACTCCGTGGCCGCCATCAGCAAGAGACTGCCGTCACATCGCCACACCTAC
AACCACAACCACAACAACCACGTGGCGACCACCAGCAACGACCACGACTACTACAACGGC
CACGGGCCTCCGCGGTCCGGCTCGGGAGGCTCCGGGGCCGGGCCCGTGTCCATCTCCTCC
CGTGGCCGCGTCCGCCGACTGACGGCGAAGGCCCGCGGTCTGCTGAGACCTTGA
Protein sequence:
MEDSTEPVNVSPELYFLIAKFLSGGPLKETAKTLLKELASAEVLPQRIDWEGNVHSQSYD
ELDSQYSEISWKHLVFVCERALQLARYSTAPAIALPGPENTAQIALQNGCVVWCAASWAA
AADLLVKVWSALDGRLCATLRGAGAEITDVSASWDGALLACGSVERLVRVWCLATGAPRA
VLQAHAGTITSVAWSPPAHRELRWLASTSTDGSVAFWTCSLDGHFLSQPVQYVERLRPGA
CHMICAAWSAGGAFLAAGSADQRVRVYALEAAGPRRVLEMAAHTDAVDSLAWAHRGLRFV
SGSKDGTAALWTLHATQWRHTLLRAQQPEEPRKLKVTMVCWDASDEFVVTAVSDRTLRVW
CSRRGEQLRSLAGHRDEAYVLEAHPRLPGVLLSAGHDGQLFVWHVLEEEPLARFHNEIEG
QGEGAIFDAKWGGGGATVAAADSHGHLVLLGLGAGHRLLSELPRELFFHTDYRPLARDAL
GGALDEQTELPPHLMPPPFLVDVEGAPHAPRHQRLVPGREALPLEQLVPRTRLDAMIEAL
AADPLSGGAGGAEGEAAGGHGVWRGEGVRHTAGSWQGLDVPLSTRPIVPPLAPSARDALE
KASVELNAYEMSWYRREMRRRPVMISTAGEGPRRRPGRRPRLPQPPRTRPPPPRAQVIPI
RLDDDPPEVADDSADTSDESVRLSGSQSSRSSRSRSSRTSRSSRSSRTRHSSAELCDSDS
SHSPSKTDSSSSSQYSDWEGGSALSPPQRARRRPARRPPAAAKRVPAPCASAPDLPEAYR
VGEWLTAVSPRKAPYHPQMGDRCLYFRLGHQRYFEAVAEKDLYKINSRDKPWERMQIYEC
EAVQVVGIKYVIRPPRVASLKLVRERDARSFTVRYHDMPDVIDFLVLRHHYDAAVARRWG
AGDRFRCMIDDSWWTGQVVERMTADEGGAADRGSSDDRGGAWAKEAAGHFLSLRVRWDNG
EVERLSPWDLEPIDPERLPSEPGGAVPVLPRELEAVLLNEWPPQACRTIAQHISQVMSLS
VAEPFVAPVDLQLYPSYALVVPYPVDLATIRARFENLFYRRAAAAQFDARWLATNAERFN
EPRSPIVRQARLVTDLLLNIIRSWEQVDVVAQYHELAASYHSDDEDDDVAHKKRPTPRGV
VPHTGHQRAGPPRAAPPRDWRSACSALLQELTASADAEPFRHPVSSAQAPDYRSVVTHPM
DLGTVSRRLSQGHYSRSDQLAADVRLVFANSRLYNTNKRSRIYSMTVRLSSLFESLWSRL
PVEIRSTREGRNRGRDRDRGRRTRARRCRQGGGGEPLDAEPRPGPAVVRPPSSASSECEP
LAATSRRVHALRETSHTSSHGSSGPGSSRHDNGSGSSTRVERPPPARADSWDSDVPLTSH
RKGKGVGKKSKNTSTASSSQAPPQLAEEWTSAPESESPTHIEVVEEELVEDEVELEYDEN
TRTSEGPRGPAGTRESVKRRPRSSGSSDDRPNKRRVREPYSSGSCSSSSSESGSGSASGS
GTGSGWRSEHSARRVRYESDRSYRPNNNYSTDDDAPLLHYRQRQGSGPGSRGGSLSGSRS
GSTSRRPLRRRGSPRRYNEDSEDDSVAAISKRLPSHRHTYNHNHNNHVATTSNDHDYYNG
HGPPRSGSGGSGAGPVSISSRGRVRRLTAKARGLLRP