| New model in OGS2.0 | DPOGS206644 |
|---|---|
| Genomic Position | scaffold8407:- 1851-4053 |
| See gene structure | |
| CDS Length | 828 |
| Paired RNAseq reads | 108 |
| Single RNAseq reads | 483 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | drosha (1e-44) |
| Best Human hit | ribonuclease 3 isoform 2 (4e-32) |
| Best NR hit (blastp) | PREDICTED: similar to ribonuclease iii [Nasonia vitripennis] (5e-57) |
| Best NR hit (blastx) | PREDICTED: similar to drosha CG8730-PA [Apis mellifera] (3e-48) |
| GeneOntology terms | GO:0031053 primary microRNA processing GO:0005634 nucleus GO:0004525 ribonuclease III activity GO:0003725 double-stranded RNA binding GO:0016075 rRNA catabolic process |
| InterPro families | IPR001159 Double-stranded RNA-binding IPR014720 Double-stranded RNA-binding-like |
| Orthology group | MCL15404 |
Nucleotide sequence:
ATGCCCTCAAAGTCAACATACGCCACGCCATCGATCAAATACAGCCCGATTTGTGCGCCA
GAGTCATCGAAAATTGGACCTTTCGTGTGCGCGCCACCAACCGAAGCCGTGGCGAACCTG
GAGTACTGCCAGGTGTTCTGTAACGCGTGCCTGTTCCCGAGACTCCAGGAGTTCATCATG
AACCAGGACTGGAACGACCCCAAGTCCAAGCTGCAGCAGTGCTGTCTCACACTCCGGTCC
GTGGAGGGAGGGGAGCCTGACATACCTGTCTATAAGGTGATAGAGTGTTTGGGCCCAACG
AACACTCGCGTGTACACCGTGGGGGTGTATTTCCGCGGATCTCGCCTCGCCGCGGCCCGC
GGACACTCTATACAGGAGGCGGAAATGAATGCCGCTGAGGAAGCTCTGAACTCAGCACAG
GAATTATTCCCTCAACTGGACCACCAAAAACGTGTGATAGCGAAGAGCATGAGGAAAAAG
AAGAACAAATTCAACGACCGCGCGAATCAGACACAGATAGAGGCTGTTCTCAAGAGAAAA
CGTATGGAGGAGGTCGTCCCCAAGGCGTACCAGCCCGGCGGGCTGGAGGAGGAACAGTCG
GACGAGAGCGTCCATGAAGCCTCGGATACGGAAATACCGGAGGATAGAAACTCAAATGAC
GATTCCGGTTTAGACAGCGACTCGGAAGTGACGAATGATAATCTAGAGAACGTTCAGGTC
AGCAGTCTCCTGAGCGACATGGAGAAGATGAAGGCGGACCTGATCAGGCGAAACGAATAC
GACAAGCTCAAGGAGAAGTGCAAGAGATCGGACTCCGACGACGATTAG
Protein sequence:
MPSKSTYATPSIKYSPICAPESSKIGPFVCAPPTEAVANLEYCQVFCNACLFPRLQEFIM
NQDWNDPKSKLQQCCLTLRSVEGGEPDIPVYKVIECLGPTNTRVYTVGVYFRGSRLAAAR
GHSIQEAEMNAAEEALNSAQELFPQLDHQKRVIAKSMRKKKNKFNDRANQTQIEAVLKRK
RMEEVVPKAYQPGGLEEEQSDESVHEASDTEIPEDRNSNDDSGLDSDSEVTNDNLENVQV
SSLLSDMEKMKADLIRRNEYDKLKEKCKRSDSDDD