New model in OGS2.0 | DPOGS215881  |
---|---|
Genomic Position | scaffold2156:- 5243-6375 |
See gene structure | |
CDS Length | 972 |
Paired RNAseq reads   | 1085 |
Single RNAseq reads   | 10030 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000430 (1e-07) |
Best Drosophila hit   | CG34461 (3e-18) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein RR-2 motif 99 [Bombyx mori] (2e-44) |
Best NR hit (blastx)   | cuticular protein RR-2 motif 101 [Bombyx mori] (5e-37) |
GeneOntology terms    | GO:0005575 cellular_component GO:0008150 biological_process GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL19900 |
Nucleotide sequence:
ATGTGGTTTGATCCTGTCGACCTTGTGGGACTGAAAGTACTGACGTTATACGCTGTTTTG
GCGGTTGCGACAGCAGGCCTTATTGCTGAACCTCATTACTCTTCCGCTGCCGCAGTTTCT
TCTCAAAGTATCGTTCGTCACGATCAACCTCATGCTGTAGCTGCCGCTCCAGTTGCAATC
CACTCTGCTCCTATTGCCATTCACTCTGCTCCTGTTGCCTACCACGCGGCACCAGTACAC
TATTCATCTGCCGGAGCTGTATCTTCTCAGTCGATCCAACGTCACGACCAACAGCGTGCT
GCTATTGCTGTTGCACCCGTAGCCCACTACGCCACTGCTCCAGTTGCTGTTCACTCTGCT
CCTGTTGCCTATCACGCAGCACCAGTACACTATTCATCTGCCGGAGCTGTATCCTCTCAG
TCGATCCAACGTCACGACCAACAGCGTGCTGCTATTGCTGTTGCACCCGTAGCCCACTAC
GCCTCTGCTCCGGTTGCTGTTCACTCTGCTCCTGTTGCCTATCAAGCAGCACCAGTACAC
TACTCATCTGCTGGAGCTGTATCTTCTCAGTCCATCCAACGTCATGACCAACCCCGTGCT
GCTATTGCCGTGGCTCCCGTAGCTCACTACTCAGCTGCTCCAGTTGCTCACTATGCAGCT
GCCCCAGTAGCTCACTACTCTGCCCCTATCGCCCATGCTGCATATGCTGCCCACGAAGAA
ATCGACTCTCACCCTCAATACGACTTCTCTTACTCCGTACATGACGGACACACCGGCGAC
AACAAGTCACAGCACGAGAGCCGCGACGGTGACGCAGTGCACGGCGAGTACTCCCTGGTA
GAGGCTGACGGATCTGTACGTACCGTTCAATACAGCGCTGATGATCACTCTGGGTTTAAC
GCCGTCGTCAGCCACTCAGCTCCATCAGCTCACGCCGTACCAGCACAAGCTCACGTTCTG
GCTCATCATTAA
Protein sequence:
MWFDPVDLVGLKVLTLYAVLAVATAGLIAEPHYSSAAAVSSQSIVRHDQPHAVAAAPVAI
HSAPIAIHSAPVAYHAAPVHYSSAGAVSSQSIQRHDQQRAAIAVAPVAHYATAPVAVHSA
PVAYHAAPVHYSSAGAVSSQSIQRHDQQRAAIAVAPVAHYASAPVAVHSAPVAYQAAPVH
YSSAGAVSSQSIQRHDQPRAAIAVAPVAHYSAAPVAHYAAAPVAHYSAPIAHAAYAAHEE
IDSHPQYDFSYSVHDGHTGDNKSQHESRDGDAVHGEYSLVEADGSVRTVQYSADDHSGFN
AVVSHSAPSAHAVPAQAHVLAHH