| New model in OGS2.0 | DPOGS212944 |
|---|---|
| Genomic Position | scaffold9204:- 21-5826 |
| See gene structure | |
| CDS Length | 1116 |
| Paired RNAseq reads | 606 |
| Single RNAseq reads | 1847 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001699 (9e-22) |
| Best Drosophila hit | Ran GTPase activating protein (5e-31) |
| Best Human hit | ran GTPase-activating protein 1 (8e-31) |
| Best NR hit (blastp) | PREDICTED: similar to ran gtpase-activating protein [Tribolium castaneum] (9e-44) |
| Best NR hit (blastx) | PREDICTED: similar to ran gtpase-activating protein [Tribolium castaneum] (4e-42) |
| GeneOntology terms | GO:0005515 protein binding GO:0007165 signal transduction GO:0005098 Ran GTPase activator activity |
| InterPro families | IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype |
| Orthology group | MCL12330 |
Nucleotide sequence:
ATGTCTTTCGATTTGAATTCTATTAGCAAGGCATTAAACGAGCCAAACAGAACGGAGAGC
GGCGTCGATTTCAGTGGAAGATCATTGAAATTAGACTCGGAACAAGATGCACAGCCAATC
ATAGAAGCGATCAACGCCTGCCCAAACCTCCATTACCTGACCCTAACCGGTAATACACTC
GGTGTCGAAGCCGCTAAAGCTATCGCAAAAGCATTATCGAGACACCCGGAATTGAAAGTC
GCTCGCTTCAGTGACATGTTCACGGGGAGGATGAAGACGGAAATTCCTCCGGCACTGAGC
GCGCTCGGTGATGGCATGATTGAAGCGGGAGCGAGGCTCACATTATTGGATCTCAGCGAC
AACGCCTTTGGACCGATCGGAGTCGAGGGTCTGGCTAAGTTACTACAGAGTGAAGTTTGC
TCGGAGTTGCAGTCCATTGAGTTAAGCCACAATGAGATTGGTCGGGAGGCTTGCATGCAA
CTGGTTGAGGCTCTGACAATACAACCGGGGGCCAAGGATAGACTGACGAGAGTTAATCTA
GCCGGCAACAGTTTGGGTGGAGCGGCCAATAAGAAAATCATGAAGGATAAGCTGGGAGCC
TCCGCTGAACTCAGCGATGGGGAAGGAAGTGACGAGGAATATGAGTCGGAGTCGGAACAT
TCTGACTACCAGTCTGGAGCGTCGGAGGACAGCGCCACGGAGGACGCCAGACACGTGGAC
ACTAGCCTCGAGGAGCACGAGGACCTGGACAGGACTGGCATAGAGGAAGTAGAGACGGAT
ATTGGGAGATTTCTCAAAGATCCAACCTTAGAGAACCTGAGCCGCCTGGGCGGTGATATA
GCAGAGGTCATTGATGCACATTTACAGAACATCAAGGACCCGGAGAGTCTCACCGTATCA
TATGTGGAGGCGTTGTGTTGTGTTTGGGGAGCCAGCGAGGGCGACAGTCAGAGGAAGCTA
TGCCGGACCACCATACAGAGAGCCCCGCAGCAGTGGATACTGGCCAACAACATGCTCAGG
GCACTGCAACTCATTAAGGTTTACAAAATAGGTCTTCGTATAATAGGAACTCGTGTTAGT
TATACTATTTATAACATAACATTGGTGGAGAGATAG
Protein sequence:
MSFDLNSISKALNEPNRTESGVDFSGRSLKLDSEQDAQPIIEAINACPNLHYLTLTGNTL
GVEAAKAIAKALSRHPELKVARFSDMFTGRMKTEIPPALSALGDGMIEAGARLTLLDLSD
NAFGPIGVEGLAKLLQSEVCSELQSIELSHNEIGREACMQLVEALTIQPGAKDRLTRVNL
AGNSLGGAANKKIMKDKLGASAELSDGEGSDEEYESESEHSDYQSGASEDSATEDARHVD
TSLEEHEDLDRTGIEEVETDIGRFLKDPTLENLSRLGGDIAEVIDAHLQNIKDPESLTVS
YVEALCCVWGASEGDSQRKLCRTTIQRAPQQWILANNMLRALQLIKVYKIGLRIIGTRVS
YTIYNITLVER