| New model in OGS2.0 | DPOGS200149 |
|---|---|
| Genomic Position | scaffold404:- 68662-78715 |
| See gene structure | |
| CDS Length | 807 |
| Paired RNAseq reads | 127 |
| Single RNAseq reads | 401 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002792 (9e-79) |
| Best Drosophila hit | transmembrane 4 superfamily, isoform A (3e-18) |
| Best Human hit | tetraspanin-11 (9e-07) |
| Best NR hit (blastp) | GD11804 [Drosophila simulans] (2e-18) |
| Best NR hit (blastx) | GI18842 [Drosophila mojavensis] (1e-19) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0016021 integral to membrane |
| InterPro families | IPR008952 Tetraspanin, EC2 domain IPR018499 Tetraspanin |
| Orthology group | MCL17350 |
Nucleotide sequence:
ATGGCACTCTCATCGAATTGCTGGAAATATCTCGTCCTGACCTTCAATGTTTTGTTCGCT
ATGTCAGCTGTGGTACTTTTCTGTACAAGCGGATTTCTTCTATACAAGCTATTCGTTTTT
AGACATTTTATAGGTATAAATGTGGAATATCCGGCAATACTGTTATTAATGATGGCTATA
ATAACCTGCTCTATATCCTGGATCGGTTGGAGGACTGCGAAATCTATGCATCAGATTCAC
GTCATAATTACCGCGTTACTAATAACACTAGTTGTGGTGATCGAGTTCGCCTGCTTCGTT
TGGGCGATGGTCGTCTGGGACAACGTAGAAATAGATATAAAGACAACCATGACGTCCTAT
TTTATGATGTCCAACGCTAGTAAGGAGACCAGTACAGATTCCGTGAGATGGGATCGGTTA
CATGTTAAGTTTGAATGCTGCGGAGTGAGTGGTCCCAACGACTACAGCGCCGCTGGCCAC
GTTCCTTTCTCGTGCTGCGGCCAGGGTCCTTTAGACTCCATCCAGAAACCTTACACATCC
GACTGCAGCACATTGTATCAGCGAGGCTGCGGTAACTTGCTGCATCAGTACGCAAAAGAG
CATTTGCTCTGGGTCGCCATGACAGCGTTGACAGCGTCACTGCTTCAGAGTTCTGGAATC
TTCTGTACTTTCTTCCTCGCTCACGCTATAAAAGAAAAACGAAGAGCTTCCATACGTCAC
TCGATGTCTGTGAGAGAGAATTTCGCGCCTGATGACTCTCTACTGGCCACGCCGACTGCT
CCCAATCCGACATTGCCGAAATATTAA
Protein sequence:
MALSSNCWKYLVLTFNVLFAMSAVVLFCTSGFLLYKLFVFRHFIGINVEYPAILLLMMAI
ITCSISWIGWRTAKSMHQIHVIITALLITLVVVIEFACFVWAMVVWDNVEIDIKTTMTSY
FMMSNASKETSTDSVRWDRLHVKFECCGVSGPNDYSAAGHVPFSCCGQGPLDSIQKPYTS
DCSTLYQRGCGNLLHQYAKEHLLWVAMTALTASLLQSSGIFCTFFLAHAIKEKRRASIRH
SMSVRENFAPDDSLLATPTAPNPTLPKY