New model in OGS2.0 | DPOGS215224  |
---|---|
Genomic Position | scaffold255:- 1906-22640 |
See gene structure | |
CDS Length | 1212 |
Paired RNAseq reads   | 2839 |
Single RNAseq reads   | 7398 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008730 (5e-59) |
Best Drosophila hit   | Synapse-associated protein 47kD, isoform E (1e-52) |
Best Human hit | synapse-associated protein 1 (2e-30) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC004616 [Tribolium castaneum] (2e-105) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC004616 [Tribolium castaneum] (4e-87) |
GeneOntology terms    | GO:0007268 synaptic transmission GO:0045202 synapse GO:0003674 molecular_function |
InterPro families   | IPR005607 BSD |
Orthology group | MCL11048 |
Nucleotide sequence:
ATGTTTTCAGGACTACAGAATCAGGTCAGCTCGTGGATGGGAGCGGCGAAGGGCGAGCCT
CAGGACGAAGAAGTTCCAACCCCGACCAAAGATGCCATGGGGGAGGCTACGGCGGAGGGC
GACAAACAAAGTCCAACCAAGGGAGGCAGCAAATTGGACCTCATCACTAACGTTAAGTCC
CAGATGACCGGATGGCTGGGAGCTGGGATTCCAATTCCTGGGCTGAGAAAAAATGAAGCG
GCTTCAGCAGAACCAGAACCGGCTCCCATTGAACCTGAACCAACAGAGGCTAAGACGGAG
CCTCGTGACGATGACGATAACTCTAGCGCCACAGGGGGCGCCGACAGCCGTCCGGCCTCC
GGGGGCGGAACCCCCACTGACGAACAGCCAGCTGGAGTCGGCAACGGTTCACAGAATAGA
AAGTTGTTCAATGTAGACGCCATCGAAATGCCGGACATTGACCAGCTGACTACGAAGGCC
GTAGCTGGCGCGAAATCTCTCGGCAGCTTCCTGTATTCCGCCGTCAATAAGGCTGGGGCA
AAGGTCAGCGAGGCCAGCGCCAAGATTAAGAAGACCGTCGAAGAAAACAGCATCTTGGGT
GAATTCAATCGCGAACAGGATGCCTTCATCAAGGGTCAAGAGAAGGGTGGAGCTGCGGCA
GTCGCGCCTTGGGTCGGAGCCCCTAACGAGGCAGCGCTCAAAGAGGAATGCCTGTCTCTA
TCTACTGATCGACGGAACTTCGTCCGCGCTCCGCCCGCGGGAGTCGATTTCGACTTCGAT
TACGACAAGATGTACCCAGTCGCCGTCGCCATCATGGGCGAGGACCCCAACCTGGAGAAG
ATGCGCTTCGAGCTCGTCCCTAAAGTCATCACTGAAGAGAACTTCTGGAGGAACTACTTC
TACCGCGTGTCACTGATCTGCCAGGCCAACGAGGCCGACGCCGGGCGCCAATCCAGCGCC
GACGACTCCCAAGATGATAAGTCAGCCAGCGAGAATCTTATAAGTAGAGAGAAAGCCTCG
CAAGGTTCTATTGAGGATGCAAAGGAAAGAATAAAGTCGTTGAGAGTCGATAAAGAGAAC
GAAGACGAACAATGGGAAAAGGAATTGGAAGCCGAGCTGAAAGAGTACGAGGTTGTCGTG
GAAAAGACGGGCGATGATAAATGGGAGAAGGAGTGCGAGGAGTTGCTCGGCGATGAACTC
GATCTTAAGTAA
Protein sequence:
MFSGLQNQVSSWMGAAKGEPQDEEVPTPTKDAMGEATAEGDKQSPTKGGSKLDLITNVKS
QMTGWLGAGIPIPGLRKNEAASAEPEPAPIEPEPTEAKTEPRDDDDNSSATGGADSRPAS
GGGTPTDEQPAGVGNGSQNRKLFNVDAIEMPDIDQLTTKAVAGAKSLGSFLYSAVNKAGA
KVSEASAKIKKTVEENSILGEFNREQDAFIKGQEKGGAAAVAPWVGAPNEAALKEECLSL
STDRRNFVRAPPAGVDFDFDYDKMYPVAVAIMGEDPNLEKMRFELVPKVITEENFWRNYF
YRVSLICQANEADAGRQSSADDSQDDKSASENLISREKASQGSIEDAKERIKSLRVDKEN
EDEQWEKELEAELKEYEVVVEKTGDDKWEKECEELLGDELDLK