| New model in OGS2.0 | DPOGS200520 |
|---|---|
| Genomic Position | scaffold3390:+ 2613-5467 |
| See gene structure | |
| CDS Length | 891 |
| Paired RNAseq reads | 7440 |
| Single RNAseq reads | 21436 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005410 (4e-81) |
| Best Drosophila hit | nanos (6e-14) |
| Best Human hit | nanos homolog 2 (1e-14) |
| Best NR hit (blastp) | nanos-like protein [Bombyx mori] (2e-92) |
| Best NR hit (blastx) | nanos-like protein [Bombyx mori] (2e-96) |
| GeneOntology terms | GO:0003723 RNA binding GO:0007283 spermatogenesis GO:0008270 zinc ion binding |
| InterPro families | IPR008705 Zinc finger, Nanos |
| Orthology group | MCL39956 |
Nucleotide sequence:
ATGGACGAAGAGAAACCTTTATTCACAGCGTCGAGCGAGAATCAATGTATGACAAATAAA
GAAAGTTTTACACAATCGGACAGAGCTATCAACGCTCCAGACAGTGCATTTTCACCGCTA
GCTGCACCATTTCAGAGCAGAATGAACAACGGTCTCCTCAACATGATGCAACAAGAACCA
CGAGCCGCTGATACTGCGCCCTCCGCCGCCGATTTAGATGACGTCTTGGTGAATCTCCGC
ATTAATGGCAACGAGCCAATATTTGACGAAATGGATCAGAATTCGCAAAATTACTTTAAT
ATGGGGGGGAGCAGAACTGATACGATGGCGGGATCTCATTCTAATATATGGGCTGAAGGA
TCTACACCTTCGGGGTCTAGGAATGGAGAGATGATTGACACCTTCGATTTCCTTATTAAG
AGTCTCTCTGCGGCCAACAATTACGTGTCCATGTTGACTAGAGAGCAGTTATCTGTGCTC
CGGTGTATAAGACCAAGTCTCTTGTACGAAATGTTGCAGGAGGTTGCTAAGGTCCGTAGT
GACAAGCGAATGAGACGAGCTCTTCCTAACGAGTGTGCTTTTTGCAAAAACAACGGTGAG
AACGAGGAATCGTACACATCGCACGCGTTGAAGGACTGGCGCGGACGTGTCGAGTGTCCC
GTGCTGAGAGCGTTCCGCTGTCCACGGTGCGGCGCGACCGGGGACAGAGCTCACACGATC
AAGTACTGCCCCGAGAACGGAGACGCCGGTATGGACCGTGGTGGTCTACTATCTCGTCGT
CGCGCGCCTTCCGGTTTGCTTCTTGGTAGAGCTGGTTGCAGCACCCCGACACCCACACAG
TCACCATCCGTCAATCAGCCGTCATTGTGGTCTAATTTCGGCATAAACTAA
Protein sequence:
MDEEKPLFTASSENQCMTNKESFTQSDRAINAPDSAFSPLAAPFQSRMNNGLLNMMQQEP
RAADTAPSAADLDDVLVNLRINGNEPIFDEMDQNSQNYFNMGGSRTDTMAGSHSNIWAEG
STPSGSRNGEMIDTFDFLIKSLSAANNYVSMLTREQLSVLRCIRPSLLYEMLQEVAKVRS
DKRMRRALPNECAFCKNNGENEESYTSHALKDWRGRVECPVLRAFRCPRCGATGDRAHTI
KYCPENGDAGMDRGGLLSRRRAPSGLLLGRAGCSTPTPTQSPSVNQPSLWSNFGIN