| New model in OGS2.0 | DPOGS215652 |
|---|---|
| Genomic Position | scaffold293:- 58892-60027 |
| See gene structure | |
| CDS Length | 1068 |
| Paired RNAseq reads | 714 |
| Single RNAseq reads | 1716 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003549 (2e-127) |
| Best Drosophila hit | CG5705 (6e-71) |
| Best Human hit | peptide chain release factor 1-like, mitochondrial isoform a (8e-72) |
| Best NR hit (blastp) | mitochondrial translational release factor 1 [Bombyx mori] (4e-146) |
| Best NR hit (blastx) | mitochondrial translational release factor 1 [Bombyx mori] (1e-135) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0006415 translational termination GO:0016149 translation release factor activity, codon specific GO:0005739 mitochondrion |
| InterPro families | IPR005139 Peptide chain release factor IPR000352 Peptide chain release factor class I/class II |
| Orthology group | MCL11420 |
Nucleotide sequence:
ATGTTAGAACATGACAATTTACATGTACAATCACGTCGTAACCCAGAAGAAATCAGACGG
CTTCATCAAATAAAACCCATCGTTACCGTGCTCGAGCAGCGCATAGCACTTTACGATAGC
ATTGAATCACTGAAGGAATTAAACAAACGTGACGGACAAGATGAGGAAATAAAAGAGATG
GTTAAGGAAGAGGCAGCTATATATTTGAAACGTATAAAAGAAATTGATGGTGAATTAGAG
TCGGTCTTATTGGAACCAAAATTGACTGACGGTGGTATATTATTAGAGGTAACAGCTGGC
GCTGGTGGACAAGAAGCGATGCTTTTTGCCAGAGAATTGTTTGATCTTTACAAAGCTTAC
TGTGAGTACAAAGACTGGCAGGTTGATGTTGCATCCATTGAAAAATCTGATATCGGTGGA
ATAAGAAAAGGATCCATGTTAGTGGCAGGTTATGGGGCACCGGAGTATATGAAAGTAGAA
TCTGGTGTACACCGAGTCCAGAGAATACCTGCAACCGAGAAAGGAGGTCGCATCCACACT
AGTACAGTATCAGTGGCTGTATTGCCGCAGGCTACAGATATAGAGATAAATATTGCTGAT
AGAGATCTAAATATTGAGACTAAACGAGCAAGCGGTGCCGGTGGACAGCATGTTAACACT
ACAGACAGCGCTGTTCGAATAACCCACCTACCAACAGGTACAGTCGTTGAATGCCAAGAA
GGACGATCACAGATAAAAAATAGAGAAATTGCAATGCAAAAGTTGAAAACTTTATTACTA
CAGAAGCAAGAAGAGGCACAAATATCTAAAATCAATAAAGAAAGAAAATTGCAGATTGGT
TCAAGTAATAGAAATGAAAAGATAAGAACTTATAATTATCCTCAAGATAGAGTCACTGAG
CATAGAGAAGGTGGTGGTACCACACATAGTCTGAAGACTTTCATGCAGGGTGGAGAACAG
TTGGAGACATTACAGGAATCACTGCTTAGACACCAGCAATACCAAGCTCTGATGGCCGAC
ATCAATGAATTAATTAACAAAAATAAAACGGAAACTGCCAAAAGCTAG
Protein sequence:
MLEHDNLHVQSRRNPEEIRRLHQIKPIVTVLEQRIALYDSIESLKELNKRDGQDEEIKEM
VKEEAAIYLKRIKEIDGELESVLLEPKLTDGGILLEVTAGAGGQEAMLFARELFDLYKAY
CEYKDWQVDVASIEKSDIGGIRKGSMLVAGYGAPEYMKVESGVHRVQRIPATEKGGRIHT
STVSVAVLPQATDIEINIADRDLNIETKRASGAGGQHVNTTDSAVRITHLPTGTVVECQE
GRSQIKNREIAMQKLKTLLLQKQEEAQISKINKERKLQIGSSNRNEKIRTYNYPQDRVTE
HREGGGTTHSLKTFMQGGEQLETLQESLLRHQQYQALMADINELINKNKTETAKS