New model in OGS2.0 | DPOGS208659  |
---|---|
Genomic Position | scaffold3019:+ 3055-11582 |
See gene structure | |
CDS Length | 2958 |
Paired RNAseq reads   | 1324 |
Single RNAseq reads   | 3662 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007756 (6e-130) |
Best Drosophila hit   | pita, isoform A (5e-58) |
Best Human hit | zinc finger protein 835 (1e-31) |
Best NR hit (blastp)   | PREDICTED: similar to zinc finger protein [Tribolium castaneum] (5e-91) |
Best NR hit (blastx)   | PREDICTED: similar to zinc finger protein [Tribolium castaneum] (6e-87) |
GeneOntology terms    | GO:0007067 mitosis GO:0008270 zinc ion binding GO:0006260 DNA replication GO:0042023 DNA endoreduplication GO:0005634 nucleus GO:0003677 DNA binding |
InterPro families    | IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | MCL16278 |
Nucleotide sequence:
ATGGAAAAGAGAAAAGAATCGTTAAGAGCTGCAAAAGTGTGCCGATTTTGCCTATCACAA
GATCAATCATTGGACAATTTGTATGACAGAAATAGAGCGCCAAAGAATGCTATTAACTTA
CATCTTAAAATATTATCATGTGTTGCAATCGAGGTATTTCCCTCAGACAAAATGCCTGCT
TACATTTGCCATCGTTGCAAAACTTTTATGACCTTGTTCTATGACTTCAAACAAATAGTA
CGGAGAGCTGATGAATCAATCTTGCAATTTTTACAAAACGGTACACCTATGGAGACAATT
TTATGGCCCTCTTCCTTGGCTAAAATCATACCAAGTCCTAATGAAATAAATGTTAAAACC
ATAGTAGAAGATGGTACAACTATCCAAGTTTCATCCCAAGATATCTCTGATAGCGATGAA
GAGGACGGGAATGTGTATAATGTTAAGATAGGGGATGGACCGGATGATTCGAATACAACT
TGCATTAAAGTTGTCACAAGCAAGGAAGAAGTGAAAGAGGATTCCGTACAAAGTGACCGC
GAGGTGTGCTGGCCGTGTGACGAGTGCGACTGCACCTACCCTCTCCAACAACTCCTGGCT
TTACACAAGCGACAGAAACACAGGCCACGTACAGTTGTATGTGATAAATGTGACGCGAAA
TTCTTCTCAAAGTATGATCTTTCTACTCATCTCCTCCGACACACCGACGAGACGCCGTTC
CAATGCGTGGCGTGTGATAAGAAGTTCAAACGGCTGATCTTACTCAAACGGCATGAAAAG
ATAATTCACGCAGATTTGCCCCAGCAAGTCTGTCCAAACTGTCCAGCGACGTTTCTGTCC
ATCGAAGAGTTGGAAGCGCATAAAAAAAGGCACATCCACATAGAGAGACCGTATTCTTGT
AACGAATGCGACAAAAAGTTTCACGAAAAGGCGACGCTCCAGCGACACATACAAGTGGTT
CACAACAGGGAGCCCACTTACTGTTGTGGGTATTGTCCAGAGCGTTTCGTGTCGATGTCC
AAGCTGACCAAGCACGTGCGCTCCCACGCCGGCGACCGACCCTACCCCTGCAAGTTCTGC
GATAAAAGTTTTACTAAATCCCATCACTACACCAGACATCTCCGTGTGAAGCATCGTTCC
CGTCACACCGAACAGTACCGCTGCGAGCAGTGCGACGACACCTTTACGAGTCAAGACGAC
CTCATCTATCACTCGGCTATCCACGCCACACAGAATCTCATCTGCCCGCTCTGCCAGGAG
AAATTTGACAACGTCGATGACGTCACCACCCATATCAAGTCGCACGTCAGCGGCGTGGAG
TTCGAGTGTGATTTCTGTGAGCTGGTGTTCACATCCAAGGAGAAACTTGACAATCACTTG
ATTACTGCGCACGAGGATGAACTGCAGCAGGTGGAATTGGATGAAATGGAAGAATTGGAA
GAATCGTCTATAGAAGAAATAGAAGAGGATAACGGAATGAACTTGAAAGACGAAGGCGAT
CATATGGTTATTGAAATCAACAAAGAAGATTACATGATAAACAAAACCTCGGAATCCGAC
GTAAAGGTTGTTAACGCACAATCTGAAGATAGCGAATCAGAGAACACGTACACGGAACTA
GCTACGGTGGATACATTGGCTGTCCTGAAGAAAAATGATGCGGCTAAAACAGTTGCCGAG
AAGTCTGAACCGAAGGCTGGCGAACAAAAACCAGTCGTCAAGAAATTCGACAAACCTGAG
CAAACACCGTCTGTAATATTGCAAAAATCTGATGAAATAAAAAGAAAAGCCGAGAAACCG
CCTCAAGAAGCAGTTCCAGAGAAAAAGGACAAGAAAACAGAAATAAACAGTGGCGGCGCG
AAAGTACAAAAAGCATCTCCAAAGAATGTTGAGATGTTGAGGACTAAACGACCGCAACTA
CAGACATCCACACCCAAAAGATCGGCCGAGGAAAAGAAATTCACTCTAGTGAACAAAACT
CCGAATGTCGACAAGAAGCCGGAACGCAGGATAACCAAAGAAAACAAAGAGCCAAAAGAT
GTGAAGGAAACAAAGAACAATAATGGAAATAAAGATGACAAGGAATCACCAAAGAGCGTC
ATAAAGAATGGTTCTAATACTGACAAAAACGCCTCCGACGATGGAATCCGGCGGTCAACA
CGACCCTCTAAGATAAAGGATTACGCGAAAATGGTGCGAGACAAGTCACAGACATCCTCC
GACCTGGATGAGAGTAGTGACGAAGACGAGGAGTATAGAGAGAGTGATAGGAGTATTGAA
AGCCGTACTAAGATACGAAGAATTAATCCTGTCAAAACAAAGCCTGCAGATGTATCCCCT
ATACCAGCAACAGCTCCTCGAAAGAGAGGACGACCAAGGAAGGAATCTAAGACAACCAAA
GATGTTCCTGCTAAAGTGAGAAAGGATGACGGTGAAGCAGCTGATACTGAAAAAGTAGAA
GAACCGTCAGCAAAAATTAAAAGTGCAGTTAAAGATGAGAAAAAAGTCGTGGACACTGAA
CCGAACGAAACTACACAAAATACACCAAAAACACCTCCCGAACAAAAACCTGCTGCTGGA
GATTTACTTGTATCTCCATCTGGACAAACACTGAAAAAGGTCCCAATCAAAGCATTACCT
CCAGGAATAAAACCTCTACCTCTACCAGTGAACGCTAGGCCTGTAGCGTCCGGAGAACTT
TGTGAAATGCAAATTGGCAAGAAAGTTGTGAAAGTACAAAAAATCGTAATGACGAAAGCG
GAAGTAGAAGCTATGGCTAAAAAAGGACTCGTTGAAATGAAGGACGGTACTATGGTATTA
AAACAAGGAATAAAACTGCCCAGCATGGAAAATTCTACTGCTAAAACATCCATAGCAGAC
AGTGACGCAGCAAAGGAATCTCTGGTGAAGAAAGAAAAAGCGGTGCCTACACGCTGCGAC
CTGGGTGATGATTCTTAA
Protein sequence:
MEKRKESLRAAKVCRFCLSQDQSLDNLYDRNRAPKNAINLHLKILSCVAIEVFPSDKMPA
YICHRCKTFMTLFYDFKQIVRRADESILQFLQNGTPMETILWPSSLAKIIPSPNEINVKT
IVEDGTTIQVSSQDISDSDEEDGNVYNVKIGDGPDDSNTTCIKVVTSKEEVKEDSVQSDR
EVCWPCDECDCTYPLQQLLALHKRQKHRPRTVVCDKCDAKFFSKYDLSTHLLRHTDETPF
QCVACDKKFKRLILLKRHEKIIHADLPQQVCPNCPATFLSIEELEAHKKRHIHIERPYSC
NECDKKFHEKATLQRHIQVVHNREPTYCCGYCPERFVSMSKLTKHVRSHAGDRPYPCKFC
DKSFTKSHHYTRHLRVKHRSRHTEQYRCEQCDDTFTSQDDLIYHSAIHATQNLICPLCQE
KFDNVDDVTTHIKSHVSGVEFECDFCELVFTSKEKLDNHLITAHEDELQQVELDEMEELE
ESSIEEIEEDNGMNLKDEGDHMVIEINKEDYMINKTSESDVKVVNAQSEDSESENTYTEL
ATVDTLAVLKKNDAAKTVAEKSEPKAGEQKPVVKKFDKPEQTPSVILQKSDEIKRKAEKP
PQEAVPEKKDKKTEINSGGAKVQKASPKNVEMLRTKRPQLQTSTPKRSAEEKKFTLVNKT
PNVDKKPERRITKENKEPKDVKETKNNNGNKDDKESPKSVIKNGSNTDKNASDDGIRRST
RPSKIKDYAKMVRDKSQTSSDLDESSDEDEEYRESDRSIESRTKIRRINPVKTKPADVSP
IPATAPRKRGRPRKESKTTKDVPAKVRKDDGEAADTEKVEEPSAKIKSAVKDEKKVVDTE
PNETTQNTPKTPPEQKPAAGDLLVSPSGQTLKKVPIKALPPGIKPLPLPVNARPVASGEL
CEMQIGKKVVKVQKIVMTKAEVEAMAKKGLVEMKDGTMVLKQGIKLPSMENSTAKTSIAD
SDAAKESLVKKEKAVPTRCDLGDDS