| New model in OGS2.0 | DPOGS200972 |
|---|---|
| Genomic Position | scaffold327:+ 17909-23420 |
| See gene structure | |
| CDS Length | 1236 |
| Paired RNAseq reads | 84 |
| Single RNAseq reads | 268 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011047 (1e-105) |
| Best Drosophila hit | M-spondin (1e-49) |
| Best Human hit | spondin-2 precursor (4e-41) |
| Best NR hit (blastp) | PREDICTED: similar to GA10108-PA [Tribolium castaneum] (2e-63) |
| Best NR hit (blastx) | PREDICTED: similar to GA10108-PA [Tribolium castaneum] (2e-65) |
| GeneOntology terms | GO:0005578 proteinaceous extracellular matrix |
| InterPro families | IPR000884 Thrombospondin, type 1 repeat IPR009465 Spondin, N-terminal |
| Orthology group | MCL40597 |
Nucleotide sequence:
ATGGTCGCCATTTTGTTTTTATTTGTCACGTGGTCAACTTATTGTACAGGATGTGATCTT
GACACGGCTGTTTATAAAGTTACAGTGAAATTTTTATGGTGTGAGACAAATTTTCCTAAA
GATTATCCTTTAAACCAACCCAAAGCACAGTGGTCTCCTTTATTTGGACAATCTCACAAT
TCTTCGTACCATCTTTATCGTGTGGGTGAAGTCGCGAGTGAGGCGATGCGAAATTTCGCT
CTTTTCGGTAAGCCGGAGGAATTGCTGAATCAAGGTGATGGGGATGAAAGGGTCTATGAT
CAGTTTCTTGCCCCAGCTGTTGGTGATGGCACAGGCGAAACTGGAAATATAGTATTTTTG
GATGGAGAGTATAGCTTGATATCAGTGGCGTGCCGTCTTATACCGTCTCCGGATTGGTTT
ATTGGCGTTGACAGCTTGGAACTGTGCGTGGATTCGTCTTGGGTGGATCAAATCACACTT
GATCTTGAGCCTCTAGATGTCGGAGCGGCCAGCGGTTTATCGTTCACGGCACCTCACTGG
GAATCTTTTCAACCAGTCAGCAAACATAGACCACAACAACCTAGTCACCCATCTGCCGCG
TTCTATTATCCAGAGTTACGTGAACTTCCCCCTATTGCCAAGATTGAGTTTTTGAAGATA
AAGGAGTATTCAATTAGAGAACAAAACGACATGATCCGAGAGGAATTATTCAATAATATA
AAGATGAAAGAAAAGTCTATGAATTCACCCAGAAGAAAAGTAAATCTGGTAGAAAATTAT
GTTAAATATGATACTACTAGAAACTATGCAGATCTAAAAAATTTGGAAGAAGATGAAGTT
GCACGTCCAGGCTATAAGCAGGATGACAGCAATGTGCTTGTTGTAACAAAATCACCTTTA
ATGGAAAATTCAAAGGAATATGGCGCTGGCTTAAGCAGCAATGACGATGTGGTGCTGGCG
GTAGCAAATGGTAGGCGATTTGGATTAGGACGGCATCTTCCTCGACACTTCAGATCTCGT
CTCCACCATGCAGTTAATAAATTACAGCCTCAAGATTGCCTCGTATCTGATTGGGGGAGC
TGGTCATCATGTTCAGTAACCTGTGGTGTGGGTGATCAATATAGAAGCAGATATGTAATC
AGGCAGAATACGAGGGACGGCAGAGATTGTCCACCCTTAGCTGATGTCAGACGCTGCAAA
AACTTCAACTCTTGTACCCGCGGGGACGGCTACTAA
Protein sequence:
MVAILFLFVTWSTYCTGCDLDTAVYKVTVKFLWCETNFPKDYPLNQPKAQWSPLFGQSHN
SSYHLYRVGEVASEAMRNFALFGKPEELLNQGDGDERVYDQFLAPAVGDGTGETGNIVFL
DGEYSLISVACRLIPSPDWFIGVDSLELCVDSSWVDQITLDLEPLDVGAASGLSFTAPHW
ESFQPVSKHRPQQPSHPSAAFYYPELRELPPIAKIEFLKIKEYSIREQNDMIREELFNNI
KMKEKSMNSPRRKVNLVENYVKYDTTRNYADLKNLEEDEVARPGYKQDDSNVLVVTKSPL
MENSKEYGAGLSSNDDVVLAVANGRRFGLGRHLPRHFRSRLHHAVNKLQPQDCLVSDWGS
WSSCSVTCGVGDQYRSRYVIRQNTRDGRDCPPLADVRRCKNFNSCTRGDGY