New model in OGS2.0 | DPOGS208796  |
---|---|
Genomic Position | scaffold1852:- 21054-47191 |
See gene structure | |
CDS Length | 1176 |
Paired RNAseq reads   | 5752 |
Single RNAseq reads   | 13702 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007658 (4e-06) |
Best Drosophila hit   | CG8180 (3e-07) |
Best Human hit | ND |
Best NR hit (blastp)   | conserved hypothetical protein [Pediculus humanus corporis] (2e-26) |
Best NR hit (blastx)   | conserved hypothetical protein [Pediculus humanus corporis] (3e-22) |
GeneOntology terms   | ND |
InterPro families    | IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site |
Orthology group | MCL18299 |
Nucleotide sequence:
ATGTTGACCGGTTTCTTAGTGTTTTCATTAATTTCACTTCAAACCTTTCAATTTGGTTAT
GCCTCCAGCCTGCTGTGTGGGCGCACCAAGGAAGTGGAGGTGGGTAGCAACGTCGGCGCA
GGCGCGGCGCTGGCGCTGACCTTACTGCGACCACAAGCAGCTACAACCAGCGGCCCTTGC
CAGCTGAAGCTGAACGCACCGGACGCAGCTGCCTTTACCGTCCGGCTTATTGATGTCAAG
GAATCTCTGTCTGATTGGGAGTGGAGTCAGTACGAAGGTCCGGGCGCTCGCAAGTGGAGC
GGCCGCAGCGCCCCGGCCCAGGACGCAGTCGACGACAACACTCGCATCTCAGTCGCAAAT
AACACTGACTCTTGTAAACTACTCGTTTATATAAGCGACACGAAGACACCGATATGGCGT
TTGTCCCTGTGCGGAGGAAACGCAGCGGCTGTGGCCGCGAAGGCTGGAACCAAATTGCTG
CCACCAAAGATAAAGCTAGTATGGACACCTCCCACAACCACCAACCACCACACGGAGAAA
CTAAGGCTGGTTGTCACCGCTGTTAATAGTGGTTCTGTATGTAACAATGAATCTCAGTTC
GTGTGCGGCGTCACAAGTCTCTGTATATCTTCATCCTTGGTGTGCGATGGTGTGAAGCAC
TGTCCGGGCGGTGAGGACGAAGATGGCAGTGCATGTTCACATCGCAGGGACTCTCCACTG
CTGGAGATGTTGAGACGGTTCGCGGCCAGGAACCAGGAGTTCCTGGGTTTGGACCAGCCA
GATGGTGTGACCAAGCCGTCGGTTATAATGAAGATAACGGAGGGGGAGCAAAAACAGAAT
GCGTTTATGGAGTTTGCAGCGGCCCTGAAGCCTTATGGACCCTGGAGCTACCTCGTGGTG
GGAATGTTGGTCTGCGCTACCATACTCATGTTCTGTCTTGCTTGGGAATGTTGCTGCAAG
CGTTCCAAGCCTTCAGACACTCCTATCAACATACCGGCCTCTTGCATCGACCTGTCACCG
ACGGTCACGGTCACGGCGTCCTCTCAGCAGCTGTTCGAGCCGGCGCCTTCGCCCCCCGAG
TACGAGCCCCCTCCATCATACTCCTCTCTCTTCCCACGAGCCTACAAGTCCTCCCCGTCC
CCCGTCCCACACTGCTCCCACCAGGAACCCGACTGA
Protein sequence:
MLTGFLVFSLISLQTFQFGYASSLLCGRTKEVEVGSNVGAGAALALTLLRPQAATTSGPC
QLKLNAPDAAAFTVRLIDVKESLSDWEWSQYEGPGARKWSGRSAPAQDAVDDNTRISVAN
NTDSCKLLVYISDTKTPIWRLSLCGGNAAAVAAKAGTKLLPPKIKLVWTPPTTTNHHTEK
LRLVVTAVNSGSVCNNESQFVCGVTSLCISSSLVCDGVKHCPGGEDEDGSACSHRRDSPL
LEMLRRFAARNQEFLGLDQPDGVTKPSVIMKITEGEQKQNAFMEFAAALKPYGPWSYLVV
GMLVCATILMFCLAWECCCKRSKPSDTPINIPASCIDLSPTVTVTASSQQLFEPAPSPPE
YEPPPSYSSLFPRAYKSSPSPVPHCSHQEPD