| Genomic Position | scaffold206:+ 153099-155297 |
|---|---|
| See gene structure | |
| CDS Length | 2199 |
| Paired RNAseq reads | 521 |
| Single RNAseq reads | 1205 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002632 (2e-127) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0005737 cytoplasm |
| InterPro families | IPR005135 Endonuclease/exonuclease/phosphatase IPR000477 Reverse transcriptase |
| Orthology group | MCL10254 |
Nucleotide sequence:
ATGAAAATACGGACACGAATTGCTTGCTGGAACGTACGAACGCTGAGCGAGGATAGCCGA
CTAGCTCAAGCAGGAGCAGAAATGCTAAGATACAAGCTGCAGATACTTGGTCTCAGCGAA
GTGCGCAGAAACGGATTTGGAGAATTACGAATGTCTGGAGGCCTTACATTTCTTTACTCA
GGGAAGGAAGACGAAGAAGGAGCACGTGAGAACGGAGTTGGATTCCTCCTTTCTGACACC
GCGAAGAAGAGCCTCCTGGACTGGAAACCTATCTCAGAGCGAATCATCACAGCTCGGTTT
AACAGTAGGGCCCGCAAGATAACCGTCATTCAGTGTTACGCGCCTACAAACTTGGCGTCA
GAGGAGGACAAGGACGATTTCTATAGTGCACTCAATCTGACTATAAAGAACATTCGCAAA
CAAGACATAGTGATCGTCATGGGGGACCTGAATGCCAAGGTTGGCACGGAAAACGTCGGC
TGTCAAAGACACATGGGCACACACGGGCTGGGAGGCCGCAACGATAATGGAGAGAGATTC
CTGGAGTTCTGCCAGGACAACGACCTTACCATCGGGGGGACATTATTTATACATGGTGAT
CACCACAAGTACACTTGGAATTCACCCGATGGAGTCACCAAGAATCAAATCGACCACCTT
GCTATCAGCGCCAAATGGCGCTCATCACTGCTTGATGTCCGCAACCGTCGTGGCGCGGAT
ATCGATAGCGATCACCACCTTCTAGTTGCCAAGGTACGACTCAAAGTAGCTGTAGCTCGG
CCCACAAACACCACTACCAAGGTTGGGAAACGATTTGAGATCAACAAACTACAGGACCCA
GTCGTAGGTGAGGCCTTTAGGGTATCACTACGAAATCGCTTCTCCGCCCTTGAAGCGGAC
CATTCATCTGTCAACGCGGAGTGGAACTACATCAAAATGGCCTACACAGAGACCAGCTCC
GTCGTTCTTGGTTACAAACGCCATGGACGCGAGGACTGGATGTCACAGAGAACTTGGAAT
CTCATTGAGGAGAGGCGCAAGTCTCACCTTCAAATTCTGGCAACTATCGATGAGGCAGTG
CGCGAAGACCTGAGGGTGCAATATAGGCGCATACGCAAATCCATATACCGCAGTGCTCGC
CACGATCGGCGAGTGTGGGCGGAAAATGTGGCGGATTGCGCCCAACGCGCTGCCAACTCC
GGTAATCTCAGAGAGATGTACAAGGCGACGAGGATCTTGACCGGAAAACGGGCCTTGAAG
AAGAAGCCCCTGAAGGACAAAAGGGGTGAACTGATTGCTACATCGGAGGGACAGCTCCAA
CGGTGGCGTGAACATTTTGAGGAAATTTTCCAAGTCTCAAATAGCCCCATAACACCAACC
ACAGCTGCCAACCTGCCCGCTGTAAGCCTCGATATCGACGAGTCTCCCCCCACTGAAGAG
GAAGTAGTGAAAGCCATCCAGTCGCTTAAGAACGGTAAAGCTCCTGGATACGACCTCATC
ACGGCGGAAATGCTAAAAGCAGATATACCTACCGCTGCGAACGCGCTAACACCTCTTCTG
CGGAACATTTGGTCAGCCGAGGAGTTACCGGATGACTGGACTAAAGGGCTTCTCATCACC
GTGCCTAAGAAGGGAGATCTCAGTGAATGCGCCAACTGGAGAGGCATTACCTTGCTTTCT
ACTCCGTCTAAAGTGCTGTGCAAGATTATCCTAGACAGACTATCGAGGGCCATTGAACCT
CTCCTTCGCAGAGAACAGGCTGGATTCCGACCCAACAGATCGTGCACCGACCAGATTATT
ACCTTACGCATAATCCTCGAACAAGCATCAGAATGGCAGAGGGAAATGTATTTGACCTTT
GTGGATTTCGAAAAAGCTTTCGACACGCTGAGATGGACAGGTATCTGGGAACGTTTACGT
GAAGTTGGAGTCCCCGACAAAATAATCAACCTGATAAAAGCCCTCTACAGGAAATATTCC
TGTAAAGTAATTCACAACGGTCTTTTGTCGGAGGACATACCAGTCAATGCAGGTGTTCGC
CAGGGGTGTCTCCTTTCTCCTATTCTCTTCCTTGTCGTTCTGGATGGTATCATGCAGAAA
GTGACGAAAAGCAAGCGCCGCGGCATAGAATGGGGACTGTCCAGCACTTTGGAAGATTTG
GACTATGCCGATGACCTATGCCTGCTGAATGATTTATAA
Protein sequence:
MKIRTRIACWNVRTLSEDSRLAQAGAEMLRYKLQILGLSEVRRNGFGELRMSGGLTFLYS
GKEDEEGARENGVGFLLSDTAKKSLLDWKPISERIITARFNSRARKITVIQCYAPTNLAS
EEDKDDFYSALNLTIKNIRKQDIVIVMGDLNAKVGTENVGCQRHMGTHGLGGRNDNGERF
LEFCQDNDLTIGGTLFIHGDHHKYTWNSPDGVTKNQIDHLAISAKWRSSLLDVRNRRGAD
IDSDHHLLVAKVRLKVAVARPTNTTTKVGKRFEINKLQDPVVGEAFRVSLRNRFSALEAD
HSSVNAEWNYIKMAYTETSSVVLGYKRHGREDWMSQRTWNLIEERRKSHLQILATIDEAV
REDLRVQYRRIRKSIYRSARHDRRVWAENVADCAQRAANSGNLREMYKATRILTGKRALK
KKPLKDKRGELIATSEGQLQRWREHFEEIFQVSNSPITPTTAANLPAVSLDIDESPPTEE
EVVKAIQSLKNGKAPGYDLITAEMLKADIPTAANALTPLLRNIWSAEELPDDWTKGLLIT
VPKKGDLSECANWRGITLLSTPSKVLCKIILDRLSRAIEPLLRREQAGFRPNRSCTDQII
TLRIILEQASEWQREMYLTFVDFEKAFDTLRWTGIWERLREVGVPDKIINLIKALYRKYS
CKVIHNGLLSEDIPVNAGVRQGCLLSPILFLVVLDGIMQKVTKSKRRGIEWGLSSTLEDL
DYADDLCLLNDL