New model in OGS2.0 | DPOGS214109  |
---|---|
Genomic Position | scaffold60:+ 144303-150457 |
See gene structure | |
CDS Length | 1029 |
Paired RNAseq reads   | 97 |
Single RNAseq reads   | 296 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006160 (5e-145) |
Best Drosophila hit   | CG5955 (9e-139) |
Best Human hit | ND |
Best NR hit (blastp)   | L-threonine dehydrogenase [Bombyx mori] (2e-168) |
Best NR hit (blastx)   | L-threonine dehydrogenase [Bombyx mori] (7e-160) |
GeneOntology terms    | GO:0003978 UDP-glucose 4-epimerase activity GO:0044237 cellular metabolic process GO:0050662 coenzyme binding |
InterPro families    | IPR016040 NAD(P)-binding domain IPR001509 NAD-dependent epimerase/dehydratase |
Orthology group | MCL16587 |
Nucleotide sequence:
ATGACGTTATTAAGAAAATTGAACTGCGCTCTGGCACTCAACACAAGGAGGTACAGTTCG
GCAATTAAAAATAAGAATTCACCAAAAATTCTAATAACTGGTGGACTTGGACAACTTGGT
GTGGAGTGTGCGAAATATTTACGAGGAAAATATGGAAGAGAAAATGTTATACTGTCTGAT
ATTATTAAACCAACGACTGAAGTGTTCAATGATGGACCATATATTTTCGCAGATATTCTA
GATTTTAAAGGTCTCCAGAAAATTGTTGTCGATCACAGAGTGGACTGGTTGATACATTTT
TCCGCTCTACTTAGTGCTATTGGCGAACAAAACGTACCATTAGCTGTCAGAGTTAATATA
GAAGGAATGCACAATGTTATAGAGCTAGCAAAGCAATATCGTCTCAGAATTTTCGTGCCA
AGTACGATTGGAGCTTTCGGACCTGACTCACCGAGAAATCCTACACCTAATATAACTGTG
CAGAGACCACGAACAATATATGGTGTTTCTAAAGTGCATGCGGAATTACTTGGTGAATAT
TATTACTATAAGTTTGGACTGGATTTCCGTTGCCTGAGATTCCCTGGAGTTATTTCCAGT
GATCCTCCCGGTGGAGGTACTACAGACTATGCCATCGCTATATTCCATGATGTTCTTCGG
AAGGGACGCTACGAGTGTTACCTGAGGCCCGACACACGTCTACCAATGATGCATGTCAAG
GATGCACTGAGAGCTCTCTCGAACTTTCTGGAAGCCCCCAACAACATGTTACACAGACGA
GTATACAACGTTACCTCAATGAGTTTCACCCCAGAAGAATTGGCTGATCATATGTTCAAA
TACATACCTGATTTTAGTATTTCGTATAAACCGGACAGTCGGCAGGATATCGCCGACTCC
TGGCCTCAGGTTTTCGACGACAGCGAAGCCAGACGAGACTGGAACTGGAAGCCGGAAGTA
GACTTGGATAATTTAGTTAAATTAATGCTGAAAGAAGTTAAGGAAAAGATAAATGATTAC
GACTATTGA
Protein sequence:
MTLLRKLNCALALNTRRYSSAIKNKNSPKILITGGLGQLGVECAKYLRGKYGRENVILSD
IIKPTTEVFNDGPYIFADILDFKGLQKIVVDHRVDWLIHFSALLSAIGEQNVPLAVRVNI
EGMHNVIELAKQYRLRIFVPSTIGAFGPDSPRNPTPNITVQRPRTIYGVSKVHAELLGEY
YYYKFGLDFRCLRFPGVISSDPPGGGTTDYAIAIFHDVLRKGRYECYLRPDTRLPMMHVK
DALRALSNFLEAPNNMLHRRVYNVTSMSFTPEELADHMFKYIPDFSISYKPDSRQDIADS
WPQVFDDSEARRDWNWKPEVDLDNLVKLMLKEVKEKINDYDY