New model in OGS2.0 | DPOGS214279  |
---|---|
Genomic Position | scaffold5725:+ 9956-11537 |
See gene structure | |
CDS Length | 1494 |
Paired RNAseq reads   | 352 |
Single RNAseq reads   | 991 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005991 (0.0) |
Best Drosophila hit   | DNA polymerase alpha 60kD (1e-114) |
Best Human hit | DNA primase large subunit (6e-99) |
Best NR hit (blastp)   | DNA primase large subunit [Aedes aegypti] (7e-130) |
Best NR hit (blastx)   | GK19278 [Drosophila willistoni] (3e-121) |
GeneOntology terms    | GO:0006260 DNA replication GO:0005658 alpha DNA polymerase:primase complex GO:0003896 DNA primase activity GO:0003887 DNA-directed DNA polymerase activity GO:0006261 DNA-dependent DNA replication GO:0005634 nucleus GO:0000084 S phase of mitotic cell cycle GO:0001745 compound eye morphogenesis GO:0006269 DNA replication, synthesis of RNA primer |
InterPro families    | IPR007238 DNA primase, large subunit, eukaryotic/archaeal IPR016558 DNA primase, large subunit, eukaryotic |
Orthology group | MCL14754 |
Nucleotide sequence:
ATGGATTTTAAAATTAAAAGAAAAACTACAAAGACTATTGTTACTGGTAGTCTTATAGAC
ACGTATCCCATTGACTTGCAATTCTATAAGATTCCACCAACTGAAAATATATCGTTACAA
GAATTTGAAACATTGGCTTTGGAAAGACTCACACTTCTAAGATGTTTAGCTACAGCAACC
ACTTTAAAAGGTCTGAGGATGTATTCCGAAGAGTGGACAGAATACGTATTAAGTGATTTG
AGAAGTCAAGGCTTAAAATATTACTCTAAGCTCTGCGAAAAATCTGGTTGTGGCACACAA
GAAGTTGATTTACAAGCCAGAAAGAAAGATCATATTGCTCATTTTATTCTGAGACTGGCT
TATTGTAGAACAGAGGATCTCCGTCGTTGGTTTGTAGCTAGAGAACTTGAGTTGTTCAAA
ATGAGATTTCTGACTATGAAAAGTGATGCCATTGATACTTTTTTCAAATTAAATAATCTG
AGCTATACCAATATATCAGATGATGAAAAAAAAGAAATAATGCCTTATCTAAGAGACTCA
ACATTCCATCAAAGCAATCAAAACATTGAGTCTTTTAAATTTTATAAAGTAAGATTCCAT
GAAGTGCTAGACTTGGTCAAAGCTAGAAAAGTTTATTTGCGTGATGGGTATGCTTATATA
CCACATAAAGACTTTATTTCAGTACTTTCTGCCCAATATAGAACGCATTTGCGTCAAAGT
CTTGCCATTGCTTGCAGGCATTTAGGAGAAATTGAACAAGATGAAAGGCTTGTTGCTTTA
TTAAAAGGCTTACATCAGTCATATGCAGGAAATGATTATACAAGTGATATTAAAACTACT
ATTCCTATTGAAAGTATTAACAGCCTTTCCATTAAATCATTTCCCTTTTGTATGCGTCAA
TTACATGAACAATTGCGCTCGGTCCATCACCTTAAGCATGGTGGCAGGCTTCAGTACGGA
TTATTCTTGAAGGGCATAGGAGTCACCCTAGAAGATTCATTAAGGTTTTGGAGGGAAGAA
TTTACGAAAATTATGGAGTCAGATAAATTTGAAAAGCAATATGCATATAACATAAGATAT
AATTATGGCAAAGAAGGCAGTAAGAAAAACTATGCACCATTAAATTGTTTAAAAATTATC
AACACCAATGTTGGACCTGGTGAATGTCATGGCTGCCCATTTAGACACAGCGACTTAAAT
GTTCTGAAGAATAAGTTAAAAGGCTATGGACTGGAAGGTCAAGCAGCCAATGATATTGTA
GATATGACTAAAAAGGGTCATTACCAGATTGCTTGCAGCAAATATTTTGATGCGATTCAC
AACACAGATCTTGGCATAGGAATAAATCACCCAAATCAATATTTTGAAGAAAGCCAAAAA
CTAATTAAAGGTGATGTCAAGTTGGAACCCAAAAAAGAAACTAAATCTAGTAATATTAAC
ATAAAAAAAGAAGAATGTTTAGAAGATATGGATTTTGAAGAGATCACCGAATGA
Protein sequence:
MDFKIKRKTTKTIVTGSLIDTYPIDLQFYKIPPTENISLQEFETLALERLTLLRCLATAT
TLKGLRMYSEEWTEYVLSDLRSQGLKYYSKLCEKSGCGTQEVDLQARKKDHIAHFILRLA
YCRTEDLRRWFVARELELFKMRFLTMKSDAIDTFFKLNNLSYTNISDDEKKEIMPYLRDS
TFHQSNQNIESFKFYKVRFHEVLDLVKARKVYLRDGYAYIPHKDFISVLSAQYRTHLRQS
LAIACRHLGEIEQDERLVALLKGLHQSYAGNDYTSDIKTTIPIESINSLSIKSFPFCMRQ
LHEQLRSVHHLKHGGRLQYGLFLKGIGVTLEDSLRFWREEFTKIMESDKFEKQYAYNIRY
NYGKEGSKKNYAPLNCLKIINTNVGPGECHGCPFRHSDLNVLKNKLKGYGLEGQAANDIV
DMTKKGHYQIACSKYFDAIHNTDLGIGINHPNQYFEESQKLIKGDVKLEPKKETKSSNIN
IKKEECLEDMDFEEITE