| New model in OGS2.0 | DPOGS200450 |
|---|---|
| Genomic Position | scaffold1672:- 161-3236 |
| See gene structure | |
| CDS Length | 1158 |
| Paired RNAseq reads | 125 |
| Single RNAseq reads | 344 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011230 (4e-100) |
| Best Drosophila hit | CG3709 (1e-21) |
| Best Human hit | putative tRNA pseudouridine synthase Pus10 (7e-27) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (2e-45) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (5e-43) |
| GeneOntology terms | GO:0016853 isomerase activity GO:0008033 tRNA processing |
| InterPro families | ND |
| Orthology group | ND |
Nucleotide sequence:
ATGGATGAAAAGGCTATATATAATTATTGTAGAAACCTCGGCTGCTGTGTAGCTTGCTGC
CTTCGATATCTTGGTATTAAAAACTCGAACGCGTATGCCAATCCAACAAATTTTGCATTA
AAATTTCAAGCCGAGGAGACTTTAAATAAAGCGTCAGAAGACGCTGAAAAATGTACGGGT
AAAATTATTGAGGGCCTTAGTGATGCAGTAAATGAATCACAAAGCGAAGAAATAAAGATA
CCAGATGATATAAGTATTGAAAATACACAAGAGAATAATTTAAACTCAAGTAATACTATA
AATGAATTGAGTAACGGTCTTGAAGTTTTTGGTAACGGTTGCTCTCCACCATCTAAGAAA
CTTAAATTAGCGACATGCATCAGTTGCTTAGGTGTTTTACAGGAATTCACTTGGCAAGAG
AGCATTAATATGGTGAAAGAAGTCCTCGATAAGAAGGGTTATGCTTGCAACACATTCGCC
TGCGCCCTCTCTGCACCAATAGCCACTATGTTACGTGAACGAGTCATCACCCTGCAACTT
ACCGATGAGTTCCCGGGATATGATCATAATTCTCTCACTCCGTTAAAGGAAGCCTGGAAA
TGGTCGTTTGGTACACATTTATCGAGACACATCCATAAAACTCTGGACTCGGGAGCCATT
TCTCCGTTGTTGGTCACACTGAATATTGACTACGATGATGATATACAGGAATTGGAGATC
CTCAAGAAGGTTTCACCGCAGCTGTTCGAAGAGAGAAGCAGGCAGAGGAGAAGATTTGCT
ACAGAATTCACTCGTAGATCAGTCGAACAGGCGCTAGAGACCGCCACGCTGCCCTCTTTC
CGTGCGGCGGGTGATGCTCTATCCCGGGTTAGCTCTAACGCACACTGCGTTAGTGTCATA
TGCACACACGCGCCCATTTACGTGTGCGGGAGGTATGTAAAGCTGAGTAGAAACCTTCCC
CAATCTCCATGGGTCTTGGATGGTAAGAGGGTCCTGCCGTCGTCAGTGCAGGAGATAATA
TTTGGACCCATAGCCAAATTTTACAATTTCAGCGATGTTGACTGTGAGGGTAGATTGAAA
TTTATAGCAGCCGGTAGAGAGGACGTTGATGTGAGGTGCCTGGGTGACGGCAGGCCATTT
GCTATTGAGGTAATTTAG
Protein sequence:
MDEKAIYNYCRNLGCCVACCLRYLGIKNSNAYANPTNFALKFQAEETLNKASEDAEKCTG
KIIEGLSDAVNESQSEEIKIPDDISIENTQENNLNSSNTINELSNGLEVFGNGCSPPSKK
LKLATCISCLGVLQEFTWQESINMVKEVLDKKGYACNTFACALSAPIATMLRERVITLQL
TDEFPGYDHNSLTPLKEAWKWSFGTHLSRHIHKTLDSGAISPLLVTLNIDYDDDIQELEI
LKKVSPQLFEERSRQRRRFATEFTRRSVEQALETATLPSFRAAGDALSRVSSNAHCVSVI
CTHAPIYVCGRYVKLSRNLPQSPWVLDGKRVLPSSVQEIIFGPIAKFYNFSDVDCEGRLK
FIAAGREDVDVRCLGDGRPFAIEVI