| New model in OGS2.0 | DPOGS200469 |
|---|---|
| Genomic Position | scaffold1672:+ 35834-39050 |
| See gene structure | |
| CDS Length | 2592 |
| Paired RNAseq reads | 1092 |
| Single RNAseq reads | 2691 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011180 (0.0) |
| Best Drosophila hit | gamma-coatomer protein, isoform C (0.0) |
| Best Human hit | coatomer subunit gamma (0.0) |
| Best NR hit (blastp) | nonclathrin coat protein gamma2-COP [Bombyx mori] (0.0) |
| Best NR hit (blastx) | nonclathrin coat protein gamma2-COP [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0006890 retrograde vesicle-mediated transport, Golgi to ER GO:0030126 COPI vesicle coat GO:0005198 structural molecule activity GO:0005515 protein binding GO:0006886 intracellular protein transport GO:0000910 cytokinesis GO:0006911 phagocytosis, engulfment GO:0007424 open tracheal system development GO:0035149 lumen formation, open tracheal system GO:0005794 Golgi apparatus GO:0035147 branch fusion, open tracheal system GO:0009306 protein secretion GO:0008362 chitin-based embryonic cuticle biosynthetic process GO:0010883 regulation of lipid storage GO:0005801 cis-Golgi network GO:0030198 extracellular matrix organization GO:0035158 regulation of tube diameter, open tracheal system GO:0005783 endoplasmic reticulum GO:0007436 larval salivary gland morphogenesis |
| InterPro families | IPR017106 Coatomer, gamma subunit IPR011989 Armadillo-like helical IPR013040 Coatomer, gamma subunit, appendage, Ig-like subdomain IPR015873 Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal IPR014863 Coatomer, gamma subunit , appendage IPR016024 Armadillo-type fold IPR013041 Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain IPR009028 Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain |
| Orthology group | MCL11508 |
Nucleotide sequence:
ATGAGCTCCTTTAAGCGTGATAAGAAGGAAGAAGAAGAGGGTGGGTGTTTTTCATTCCAG
AACTTAGATAAAACCATCGTTTTGCAAGAATCGAGATATTTCAACGAGACGCCGGTGAAC
CCTCGGAAATGTACACAAATTCTAACGAAAATACTATTTCTGCTCAACCAAGGAGAGACA
TTCTCCACTCAGGAAGCTACAGAGGCTTTCTTCGCCATCACGAAGCTTTTCCAATCCAAT
GATGTTATTTTGCGGCGTATGGTGTATCTTTGCATCAAGGAATTGAGCAAACTGGCTCAG
GATGTGATTATAGTTACATCTTCCTTAACCAAAGACATGACGGGCAAGGAGGATCTGTAT
AGGGCTGCGGCTATCCGAGCGCTGTGCAGTGTCACCGATAGCACCATGATTCAAGCTATT
GAAAGATACATGAAGCAAGCTATCGTTGATAGAAACCCCGCGGTCAGTTCTGCGGCTCTG
GTGTCGTCTTTGCATCTATCATCTACTTCACCGGATCTGGTGAAGCGATGGACGAGCGAG
GCACAGGAAGCGTTGAACAGCGAAAAGTCACTCGTCTCGTACCATGCACTCGGAATACTT
GTGAATATTCGTAGAACTGACAAGCTGTCAACCATGAAGCTAGTGACACGTCTCACCAAA
TCCTCAATAAAATCACCATACACTCTGTGCTTATTGATTCGTCTCGCTGCTCAACTAGTT
GAAGATGATGCTTCGGAGACATCCCAAGCTTACATCGAGTTCATTGATGGCTGTCTCCGG
CACAAATCAGAAATGGTGATTTATGAAGCTGCTCACGCGATTGTCAACTTGCGTAAAACA
ACACGAGATTTAGCTCCGGCTGTGTCAGTGCTACAGCTGTTCTGTGGTTCCTCCAAAGCG
ACCTTGAGACTCGCTGGAGCTAGAACCCTCGCCAAACTGACGACTAAACATCCAGCTGCA
GTATCAGCCTGCACCATCGACCTGGAAAATCTGATCTCCGATCCAAACAGATCAGTTGCT
ACGCTGGCAGTCACGACTCTGCTGGCTACAGGCGCTGAGAGCTCCATCGATCGTCTCATG
AAGCAGATCTCTAGCTTCGTTTCGGAGATATCGGACGAGTTTAAAATTATCGTAGTCAAG
GCTATCAAACGCCTGTGCCTCAAGTTTCCTAGGAAGCACCAATCGTTGGCTACATTTTTG
GCCGGCATGCTCCGCGATGAAGGTGGTTTAGATTATAAAGCGGCCATTGCTGACGCGATC
ATCGCTCTGGTGGAAGAAAACCCCGATGCCAAAGAGACAGGACTGGCTCATCTGTGCGAA
TTTATCGAAGATTGCGAGCACCAAGTCCTGTCGGTTCGGATTTTGCATTTATTGGGACGC
GAAGGCCCTAAAACTCGCCATCCCACGAGATACATCAGATTCATCTACAATAGGGTCATC
CTGGAGACGGGGCCGGTCAGGGCGGCTGCGGTCTCTGCTGTGGCGCAGTTCGGAGCCCAC
ATTCCTGAACTCCTGCCAAATATAAGAGTTCTGTTAAGTCGCTGTGAAACCGACGAGGAA
GATGAAGTGAGGGATCGCGCGATCTTCTTCAACGCGATCTTCAATTCGGGCAACGAGAAA
TTGATAAGAGATTATATCACCCACGTACCGAGAGTGAACCCGGTTCTGTTGGAAAAAGCC
CTCCATGATCATGCCAAGAACAGGCCGAACGAACCCTTCGACATCCTGAGCGTCCCGGAG
ATGGAAAAACCGAAGAGAGAAGAAGTGGTAGAGATCGATGTGAAGCAACCGAAACAGATA
ACAATCGAGGAGATTTACAGCCAGCAGCTCGCGAAAATACCGGGCATCGAGAAATTGGGG
ACTATTTTCAAAACCAATAATCCGGTCGAACTCACGGAAGAGGACACAGAGTTCCAAGTC
CGTCTGATTAAACACATCTACGTTCGTCACGTCGTCCTGCAGTTTGAATGCACGAGCACT
ATCAACTTCCATGTCTTCGAGAATGTGACCGTAAAATTGGATCTGCCCAACGAGTTCGAA
GTGAAGAACATGGTGCCCATCAAGTCGTTGGCTTTCAACAGACCCGAGAGCATTTTTGTA
ATCGTGGAATTCCCCTGCTCGTTTCTGGACAGCATGAACCCCTTCGGTGCCATCCTGGAG
TTTGTGACACGCGAATGTCACCCAATCACTTGTATGCCAAACCCCGGCCCAGGGTACATA
GACACTTATCCTATCGAGGACTTCTACATCAGCTGCGCCGATCAAATACGCACGCGAGTC
ACCGGCGATGACTGGGAGCAGACTTGGGAGAGCGCTTTCAACGTCATCGAGATTTCAGAT
ACTTTCTCTCTCCCTCAGCGAGACGCTGCGGCCGCTGCTAAGTCGGTTTGCGAATATCTC
GGTCTACCGAAAGGTTCCATCACCGGGGACACGGTTAAGGAGATAAGGGGGGCCGGTATT
TTTAGGGGCGGAGCGCCTTTCTTGGTCAGGGCTCGCATAGCGCCGACGAGCGCTGGAACT
GCTACTATGCTGATCGCAGCACGATCTCCGAGAGAAGACGTGGCACAACTACTACTCAAC
GCTGTAGGTTAA
Protein sequence:
MSSFKRDKKEEEEGGCFSFQNLDKTIVLQESRYFNETPVNPRKCTQILTKILFLLNQGET
FSTQEATEAFFAITKLFQSNDVILRRMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLY
RAAAIRALCSVTDSTMIQAIERYMKQAIVDRNPAVSSAALVSSLHLSSTSPDLVKRWTSE
AQEALNSEKSLVSYHALGILVNIRRTDKLSTMKLVTRLTKSSIKSPYTLCLLIRLAAQLV
EDDASETSQAYIEFIDGCLRHKSEMVIYEAAHAIVNLRKTTRDLAPAVSVLQLFCGSSKA
TLRLAGARTLAKLTTKHPAAVSACTIDLENLISDPNRSVATLAVTTLLATGAESSIDRLM
KQISSFVSEISDEFKIIVVKAIKRLCLKFPRKHQSLATFLAGMLRDEGGLDYKAAIADAI
IALVEENPDAKETGLAHLCEFIEDCEHQVLSVRILHLLGREGPKTRHPTRYIRFIYNRVI
LETGPVRAAAVSAVAQFGAHIPELLPNIRVLLSRCETDEEDEVRDRAIFFNAIFNSGNEK
LIRDYITHVPRVNPVLLEKALHDHAKNRPNEPFDILSVPEMEKPKREEVVEIDVKQPKQI
TIEEIYSQQLAKIPGIEKLGTIFKTNNPVELTEEDTEFQVRLIKHIYVRHVVLQFECTST
INFHVFENVTVKLDLPNEFEVKNMVPIKSLAFNRPESIFVIVEFPCSFLDSMNPFGAILE
FVTRECHPITCMPNPGPGYIDTYPIEDFYISCADQIRTRVTGDDWEQTWESAFNVIEISD
TFSLPQRDAAAAAKSVCEYLGLPKGSITGDTVKEIRGAGIFRGGAPFLVRARIAPTSAGT
ATMLIAARSPREDVAQLLLNAVG