| New model in OGS2.0 | DPOGS212512 |
|---|---|
| Genomic Position | scaffold9908:+ 117-4612 |
| See gene structure | |
| CDS Length | 1218 |
| Paired RNAseq reads | 179 |
| Single RNAseq reads | 933 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009779 (8e-135) |
| Best Drosophila hit | dilute class unconventional myosin, isoform A (2e-82) |
| Best Human hit | myosin-Vb (1e-92) |
| Best NR hit (blastp) | PREDICTED: similar to myosin VA (heavy polypeptide 12, myoxin) [Tribolium castaneum] (6e-108) |
| Best NR hit (blastx) | PREDICTED: similar to KIAA1119 protein [Monodelphis domestica] (3e-94) |
| GeneOntology terms | GO:0005524 ATP binding GO:0017137 Rab GTPase binding GO:0003774 motor activity GO:0005516 calmodulin binding GO:0043197 dendritic spine GO:0000166 nucleotide binding GO:0032880 regulation of protein localization GO:0003779 actin binding GO:0016459 myosin complex GO:0015031 protein transport GO:0019717 synaptosome GO:0035255 ionotropic glutamate receptor binding GO:0043025 neuronal cell body GO:0048471 perinuclear region of cytoplasm |
| InterPro families | IPR001609 Myosin head, motor domain IPR000048 IQ motif, EF-hand binding site |
| Orthology group | ND |
Nucleotide sequence:
ATGGAGGGTAGGGAGAGGAATGCAGGGGTAGGTACTCTTGGCTTTGTGGGCGTGGGAGAA
ATACTAGAGGAGACGATATCACCTTCATTTCAAAAGGACGAACAAATATCATGGAAGATG
ATAGACTTCTACGACAACCAGCCCTGCATAGACCTGATCGAGGACCGGTTAGGTGTGCTG
GCCCTGCTGGACGAGGAGTGCCGCGTGCCGCAGGGCTCCGACCAGGGCTTCGTAGCCAAG
CTACACGACAAGTGCTCCAAGTACCCGCACTTCATGAAACCGAGGTTCGGCAACGCCGCC
TTCATAATAAAACACTTCGCTGATAACGTTGAATACCAATGCGGCGGGTTTCTGGAGAAG
AATCGGGACACGGTTCTGGAGGAGCAGCTGGAGTGCGTGAAAACCGCGACCACCTGCAGG
CTCATACACGTTATATTCGCTGAAGCCAGCGTCGACCACTCAGCGACCCTACCACTACCC
TCCAGAAGAAAGGCCACTCCATCCATGGCTCTAAGTAGCCTCACTCAACCTCCCCGTCGA
GCATCCGGTCAGAAACAAACTGTGGGCTCTCAGTTCAGGGCGTCCCTATCAGCTCTCATG
GCGACCCTCTCCGCTACGACTCCACACTACGTGCGCTGCATCAAGCCGAATGACACCAAG
CAGCCGTTCCAGTTCGACGCGGCCAGGGCTGTCAACCAATTGAGAGCATGCGGCGTGTTG
GAGACTATACGAATATCGTCAGCTGGATTCCCATCCAGGTGGCTGTACCAGGATTTCTTC
CAGAGATACCGTCTCCTCTGCCTTTACAAAGAGATAGATCGATCCAATATTAAGGCGACG
TGCTCCAAAATATTGGAGAAACATTTGAAAGACCCGGATAAGTTTCAGTTCGGTGCCACC
AAAATATTCTTCAGGGCCGGGCAGGAGATCAGGCGTAACCGTGCTGCTATCAAGATCCAG
AAGACAGTACGCGGCTGGCTGGCCAGGGTCAAGTTCCAGAGGATGAGGAAGCTAGCGATT
GGACTGCAAGCGGTGGCGAGAGGCTACCTGGCCAGGAGGCTGTATAAGAACAAGAGGATA
CTTAAGGCTACTATCGGTATCCAGCGATACGCCCGCGGCTACCTCGTCCGCCAGAGAGTC
AGGAAGCGAAGGCAGCAAATCATCATCTGTCAGTCGGCGGTACGTGTCCATACTACGATA
TATAATATATTTATTTAA
Protein sequence:
MEGRERNAGVGTLGFVGVGEILEETISPSFQKDEQISWKMIDFYDNQPCIDLIEDRLGVL
ALLDEECRVPQGSDQGFVAKLHDKCSKYPHFMKPRFGNAAFIIKHFADNVEYQCGGFLEK
NRDTVLEEQLECVKTATTCRLIHVIFAEASVDHSATLPLPSRRKATPSMALSSLTQPPRR
ASGQKQTVGSQFRASLSALMATLSATTPHYVRCIKPNDTKQPFQFDAARAVNQLRACGVL
ETIRISSAGFPSRWLYQDFFQRYRLLCLYKEIDRSNIKATCSKILEKHLKDPDKFQFGAT
KIFFRAGQEIRRNRAAIKIQKTVRGWLARVKFQRMRKLAIGLQAVARGYLARRLYKNKRI
LKATIGIQRYARGYLVRQRVRKRRQQIIICQSAVRVHTTIYNIFI