| New model in OGS2.0 | DPOGS210917 |
|---|---|
| Genomic Position | scaffold2464:- 11037-12548 |
| See gene structure | |
| CDS Length | 816 |
| Paired RNAseq reads | 7753 |
| Single RNAseq reads | 23353 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003066 (1e-111) |
| Best Drosophila hit | rieske iron-sulfur protein, isoform B (3e-68) |
| Best Human hit | cytochrome b-c1 complex subunit Rieske, mitochondrial (1e-67) |
| Best NR hit (blastp) | ubiquinol-cytochrome c reductase [Bombyx mori] (2e-129) |
| Best NR hit (blastx) | ubiquinol-cytochrome c reductase [Bombyx mori] (4e-111) |
| GeneOntology terms | GO:0008121 ubiquinol-cytochrome-c reductase activity GO:0016491 oxidoreductase activity GO:0055114 oxidation reduction GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors GO:0016020 membrane GO:0051537 2 iron, 2 sulfur cluster binding GO:0046872 metal ion binding GO:0006810 transport GO:0051536 iron-sulfur cluster binding GO:0070469 respiratory chain GO:0022900 electron transport chain GO:0005739 mitochondrion |
| InterPro families | IPR004192 Ubiquinol cytochrome reductase, transmembrane domain IPR017941 Rieske [2Fe-2S] iron-sulphur domain IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit IPR005805 Rieske iron-sulphur protein, C-terminal IPR014349 Rieske iron-sulphur protein |
| Orthology group | MCL13990 |
Nucleotide sequence:
ATGACTTCTGTGGCTCGAGCGGGGCACTTAGCTCCATTTTTTAAGGCCTCTTGCTCTATC
ACTAATAATGGCCTGAAGCCCGTTGTAGCAATCGCAGCCCCAGCAGAAAAACTGGTCGTC
CAACCTCTGCCAAAAACTTCGACTGTTCAGTCACTTCATGGGGCCCTGCCCGTACAGAGT
TTGAAAGTAAGACACGGAAATTTCGCCCCAACTCAAGTACGTTTTGCGCATACTGATATC
GCTTATCCCGACTTTTCCGCCTATCGTCGCAAGGAGAGCCAGGACCCAAAGGTTAAGGCC
GATGACAGTGTCGATCGCCGCCAAGCCTTCACCTACCTTATTGCAGGAGCGGGATCTGTT
GCGAGTGCCTATGCTGCCAAGTCTGTGGTCACACAGTTTGTGTCATCGATGGCGGCTGCC
GCCGACGTCTTGGCTTTAGCTAAGATTGAAATTAAACTTGGTGATATTCCCGAAGGAAAG
TCTGTTACCTTCAAATGGCGTGGAAAGCCACTGTTCATTCGTCACAGGACAGCAAACGAA
ATCTCAACCGAGAAGGCAGTCCCTGTAGACCAGCTTCGAGACCCCGAACATGATGATCAA
CGCACCCAAGACCCTAAATGGCTTGTGGTGATCGGTGTGTGCACCCACTTAGGTTGTGTG
CCTGTTGCAAACGCTGGAGATTTTGGCGGTTACTACTGCCCTTGCCACGGTTCCCATTAT
GATGCTTCTGGCCGCATTCGCAAAGGCCCAGCACCTCTCAACCTTGAAGTACCCCCGCAC
ACGTTTGTAGATGAAAGCCTCCTAGTTGTAGGATAA
Protein sequence:
MTSVARAGHLAPFFKASCSITNNGLKPVVAIAAPAEKLVVQPLPKTSTVQSLHGALPVQS
LKVRHGNFAPTQVRFAHTDIAYPDFSAYRRKESQDPKVKADDSVDRRQAFTYLIAGAGSV
ASAYAAKSVVTQFVSSMAAAADVLALAKIEIKLGDIPEGKSVTFKWRGKPLFIRHRTANE
ISTEKAVPVDQLRDPEHDDQRTQDPKWLVVIGVCTHLGCVPVANAGDFGGYYCPCHGSHY
DASGRIRKGPAPLNLEVPPHTFVDESLLVVG