| New model in OGS2.0 | DPOGS210910 |
|---|---|
| Genomic Position | scaffold2464:+ 1646-5904 |
| See gene structure | |
| CDS Length | 1203 |
| Paired RNAseq reads | 278 |
| Single RNAseq reads | 907 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003093 (2e-113) |
| Best Drosophila hit | spire, isoform C (3e-52) |
| Best Human hit | protein spire homolog 1 isoform a (3e-12) |
| Best NR hit (blastp) | spire, putative [Pediculus humanus corporis] (2e-86) |
| Best NR hit (blastx) | spire, putative [Pediculus humanus corporis] (1e-72) |
| GeneOntology terms | GO:0007316 pole plasm RNA localization GO:0007315 pole plasm assembly GO:0007304 chorion-containing eggshell formation GO:0048477 oogenesis GO:0030036 actin cytoskeleton organization GO:0003779 actin binding GO:0045451 pole plasm oskar mRNA localization GO:0008270 zinc ion binding GO:0016192 vesicle-mediated transport GO:0030717 karyosome formation GO:0045010 actin nucleation GO:0005737 cytoplasm GO:0008017 microtubule binding GO:0030029 actin filament-based process GO:0005938 cell cortex GO:0005515 protein binding |
| InterPro families | IPR011011 Zinc finger, FYVE/PHD-type |
| Orthology group | MCL10342 |
Nucleotide sequence:
GATGACGAAGACGAAGACGACACAGAGACTTGTGTCAGTCCTGAAACCTGCCCGCCCCAG
CCCTTCCCGAGGCACACCATCAAACAGACACCGCCGAAACCATGGAAGAGAACCGTGTCC
GTGGATACGCCGCGGGCTCCTCCCCGCGCGCGCATCTCACACGACGAGTACCATCAGTTT
TTCGACGAGACCCTCGAATCCTACGACCTGGCTACCCAATGTCCCTCCCGTCGAGCGTCC
ATGCGTCGCCACACAATAACACACGCACACGCGTGCCCCGCGACCGACGGCGCACAGTCA
CTGCCACATTCGAGACCGGGTTCTCGTGCGTCCTGCGCAGGGGCGTCGCTCAGCAGTGAC
GACGCTCAGCTGAATGAGTTGTCGTGGTCCCGAGCCTCGCTCCAGGACGAGCTGATCAAG
TCGGTTAGTGACAGCCCTACCAGCACGCATAAGCAATGGCAGGACGCGATTATATCAGAC
GAGCGTCTCTCGCTAACGCTAGAGGAGATCGTCCACATCAGATCTGTGCTGACGAAGGCT
GAGCTAGAGGTTCTGCCGGTGGAGGGCAGGGTCAAAGAAGACGTGGAGAGACGACGGGTT
TGTTTTCTGTGCCTGAAGACGAGGTTCGGCATCTTCGGTCCTTGGGGTCAGAAATGCAAA
CTGTGCAAGAAGACCGTCTGTCAGAAATGTTGTTCCAAGATGCGTATCCCGACGGAACAC
TTCGCGCACGTCCCCGTTGCGTTGTTGTCGCCGTCCTTGCTCCCCTCCCCCGACGAGGAG
ACCGCCTTCCCCCGCTCGCTGATGGCGCGGCTCGTGTTGCCCGAACACGCGGCGTCGGTA
GAGAACAGTGTAGGCTCGGCCCCCAGCAGCCCGGGCTCGCGCCGCATCACGTCAGCCCCG
GGCTCCCGCGGCGCCTCCGCCCTCGGTTTCTCGGACTCCTCCGGCGGCCCCGGCAGCATG
CCCTGTGTCTCAACACCGCTATCCACATTCTCCACATTCGATCGCAGAGCGAGATACGGT
CGCAGTGCGGGTTCGGGCGCGGCGGAGAGACTGCGAGGCGTGCAGATGGCAGTCTGTCAC
GACTGTAAGGCGATGGTGCTTCAGATCATAAAATCCTCGCGCGCCGCCCGCTCCGCTTCC
CGCGACCGCGCGCTGCGACACCTCACCCTGGACCTGGCGCCCGTATACACCGCGGACTGC
TAG
Protein sequence:
DDEDEDDTETCVSPETCPPQPFPRHTIKQTPPKPWKRTVSVDTPRAPPRARISHDEYHQF
FDETLESYDLATQCPSRRASMRRHTITHAHACPATDGAQSLPHSRPGSRASCAGASLSSD
DAQLNELSWSRASLQDELIKSVSDSPTSTHKQWQDAIISDERLSLTLEEIVHIRSVLTKA
ELEVLPVEGRVKEDVERRRVCFLCLKTRFGIFGPWGQKCKLCKKTVCQKCCSKMRIPTEH
FAHVPVALLSPSLLPSPDEETAFPRSLMARLVLPEHAASVENSVGSAPSSPGSRRITSAP
GSRGASALGFSDSSGGPGSMPCVSTPLSTFSTFDRRARYGRSAGSGAAERLRGVQMAVCH
DCKAMVLQIIKSSRAARSASRDRALRHLTLDLAPVYTADC