New model in OGS2.0 | DPOGS200889  |
---|---|
Genomic Position | scaffold5:- 472864-483936 |
See gene structure | |
CDS Length | 2469 |
Paired RNAseq reads   | 1259 |
Single RNAseq reads   | 2899 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000540 (0.0) |
Best Drosophila hit   | CG11727, isoform D (0.0) |
Best Human hit | EVI5-like protein isoform 1 (5e-130) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC002602 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to ENSANGP00000001286 [Nasonia vitripennis] (0.0) |
GeneOntology terms    | GO:0005622 intracellular GO:0032313 regulation of Rab GTPase activity GO:0005097 Rab GTPase activator activity |
InterPro families   | IPR000195 Rab-GAP/TBC domain |
Orthology group | MCL11202 |
Nucleotide sequence:
ATGAAGGTGGACGCAGAAGCCAGGGAAGCAGTGCCGGCCTGCAACGTCACCCTGATTGCT
AGTAATACAGAATCGCCAGTGTCATCCCTTGATGACTGCGGTGTGAGTGAGACAGAGGGT
ATACCGACACCTCAGAAGGCGCTACTTGCCAAGCTGGAGGAAGAAAATAGAAGAATCGAG
GCGGACGCTAAGAGCCCCTCGCTCACAACTGTCCACAGCCGCAAGAGCTCGGACACATCA
CAAATATCACTGGCCTCTGCCACAAGTTCAAGTCATGAAGAGGCACGGGTTGCTACAAAC
GGAGAGGAGGATCTGTGGGGTTTGTGGGGCAGATTAGTCAGCAACTGGGAGAATGAATGG
CGGAGGCGCAACCAGTTTGTGAGGGATCTGGTGAGGCAGGGAGTGCCTCATCATTTCAGA
GGGATTGTATGGCAGCTGCTGGCTGGCGTCGATTCGTCGCCGGAGAAGAAGTTGTATGCG
TCTTATATTAAGGCCAAATCAGCTTGTGAAAAGGTGATTCGACGTGACATAGCCAGAACG
TACCCAGAACACGATTTCTTTAAGGAAAAGGACGGATTGGGGCAGGAGTCGCTATTCAAT
GTGATGAAGGCGTATTCGCTACATGACAGAGAAGTTGGCTATTGTCAAGGATCTGGATTC
ATAGTAGGATTACTTTTAATGCAGATGCCAGAAGAAGAAGCCTTCGCGGTTTTGGTTAAG
ATAATGCAACAGCATCGCATGCGGGACATGTTCAAACCCAGTATGGCTGAACTCGGGCTG
TGTATGTTTCAACTGGAGAATTTAGTTCAGGAACTGCTGCCAGACCTGCACGTTCATTTT
CAATCACAGAGTTTCAGTACATCGATATACGCTAGCAGCTGGTTCCTGACTTTGTTCACC
ACGACGCTATCCCTACCGTTGGCGTGTCGCATCATGGACGTGTTCCTCTCGGAAGGTATC
GAGATCGTTTTCAAGGTCGCACTAGCGATGCTCACTCTCGGCAAGAACGATCTGCTATCT
CTGGATATGGAAAGCATACTCAAGTATATACAGAAGGAGTTACCAGCGAAGGCGGAGGCA
GATCAAGATGGTTTCATGAATCTAGCGTATTCTATAAAAGTTAATCCAAAGAAAATGAAG
AGATTGGAAAAAGAATACACTGTTATTAAGACAAAAGAGCAAGGGGACATCGCTGTCGTT
AGGTGCCTGCGTCAAGAGAATCGTATTCTGAAACAGCGTGTGGAGCTTTTGGAGAAGGAG
AGCTCTGCGTTGGCTGAGCGTTTGGTTCAAGGTCAGGTGGACAGAGCCGAGGGTGAGGAA
GAAACCTTCGCACTGGCGAGAGAAGTGCAAGCCTTGAGGAGGGCCAACGTTGACGCTCAA
CAAAGACTCGCCGTTGCCCAGGACGAGATACGATCGCTGGAGATGACTATTGCTGAGAAT
AACTCAAGACAATCATCACTAGAAGGTACTGAGGGTAATAACGTTAAAGGTGAGGAGTTA
GCTCGTTGTCTTCAAAGAGAGCTGGTGCGGGCCAGACTGGACGCGGCGGAGAGACAGGCT
CAAGAAAGGGAACTGATCGCGAGGATCGCTGAACTTGAGAACGAAAATAAGACGCTGAGG
AAACAAAGAGTTGACAATAATGTGGCACATTTACAGGACGAGTTGATCGCCGTTAAACTA
AGGGAGGCCGAAGCTAATTTATCCTTGAAAGATCTTCGGCAACGTGTTACAGAACTGTCG
GAGGCTTGGCAGAGACATCTACAAGAACATAGACAAGAAACTCCAACGCCTCCCGCCCAG
TCCAACGTGGTCTCAGATATAATGGCCACCCCCAAGAAACTGTTGCGAGCGTGGGAGGGA
AGATCCACTGATATGCAGAAAGTTGAGGAGGAACTTATGACTGTTAAAATACGTGAGATT
GAGGCACTCACAGAATTGAAGGAGCTAAGGTTGAAGGAGATGGAGCTGCGTACTCAAGTG
CAGGTGTCGACGAACCAGCTGCGACGGCAGGACGAAGAGCTGCGACAGCTGCGTGAAGAG
CTGGACGCAGCGCTACAGCGGGAACGAGCGCTGGTTACTAGACAGAGGGAGTTCCAGCAT
AAATACGCTGACCTTGAGAGCAAGGCTAAATATGAATCCATGCAAGCAAATATTAGAAAT
ATGGAGGACGCCCAGAGAATAGCAGAGCTGGAAACAGAAGTCTCTGAATATAAATTAAAA
AACGAGGTAATGGCTACAGAGGGTGAACTCCGCAGCAATATGGATGACTCGGAGAGAGTT
CGGGAATTACAGGAACAGGTTGCTGAGCTGAAGGCTGAGGTGATGAGGTTACAGGCGTGG
CGTTCCCGAGTGTACGGGCAAAGTTTTAGCAGATCTGTCTCCTTAGAGGAAGACTTGGAG
GACGATGAAAAACTCAAACTAACATTACGCAGGGAGTCAGCCGCTTCGCTCGACATGAAA
AAGACGTAG
Protein sequence:
MKVDAEAREAVPACNVTLIASNTESPVSSLDDCGVSETEGIPTPQKALLAKLEEENRRIE
ADAKSPSLTTVHSRKSSDTSQISLASATSSSHEEARVATNGEEDLWGLWGRLVSNWENEW
RRRNQFVRDLVRQGVPHHFRGIVWQLLAGVDSSPEKKLYASYIKAKSACEKVIRRDIART
YPEHDFFKEKDGLGQESLFNVMKAYSLHDREVGYCQGSGFIVGLLLMQMPEEEAFAVLVK
IMQQHRMRDMFKPSMAELGLCMFQLENLVQELLPDLHVHFQSQSFSTSIYASSWFLTLFT
TTLSLPLACRIMDVFLSEGIEIVFKVALAMLTLGKNDLLSLDMESILKYIQKELPAKAEA
DQDGFMNLAYSIKVNPKKMKRLEKEYTVIKTKEQGDIAVVRCLRQENRILKQRVELLEKE
SSALAERLVQGQVDRAEGEEETFALAREVQALRRANVDAQQRLAVAQDEIRSLEMTIAEN
NSRQSSLEGTEGNNVKGEELARCLQRELVRARLDAAERQAQERELIARIAELENENKTLR
KQRVDNNVAHLQDELIAVKLREAEANLSLKDLRQRVTELSEAWQRHLQEHRQETPTPPAQ
SNVVSDIMATPKKLLRAWEGRSTDMQKVEEELMTVKIREIEALTELKELRLKEMELRTQV
QVSTNQLRRQDEELRQLREELDAALQRERALVTRQREFQHKYADLESKAKYESMQANIRN
MEDAQRIAELETEVSEYKLKNEVMATEGELRSNMDDSERVRELQEQVAELKAEVMRLQAW
RSRVYGQSFSRSVSLEEDLEDDEKLKLTLRRESAASLDMKKT