| New model in OGS2.0 | DPOGS200893 |
|---|---|
| Genomic Position | scaffold5:- 405863-408221 |
| See gene structure | |
| CDS Length | 1572 |
| Paired RNAseq reads | 615 |
| Single RNAseq reads | 1651 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000544 (0.0) |
| Best Drosophila hit | CG32372 (3e-62) |
| Best Human hit | leucine-rich repeats and immunoglobulin-like domains protein 3 isoform 2 (6e-12) |
| Best NR hit (blastp) | leucine-rich transmembrane protein, putative [Pediculus humanus corporis] (2e-119) |
| Best NR hit (blastx) | leucine-rich transmembrane protein, putative [Pediculus humanus corporis] (3e-112) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL16358 |
Nucleotide sequence:
ATGCCGCGACATGTTCTCAGACATCTTCCTCATGTCAAGACAGTTGACTTATGCAGGAAC
AAGATAACTAAGTTGACGGAAGAAGATTTTAAAGACATTCAAGAAGTGGAACACTTGCTT
GTTGCTGATAATCAGATATCAAAGATTGAAAGACATGCAATACCTAAACGGTTAAAGCAC
GCTCATCTTGGTGTCAACAAACTAAACTCTTTAAACGGAGCTCTGCGTGATTTAGATAGT
TTGGATTGGATATTTATAAACGCTAATCATTTAAAGTCCATTGATAACGAACTTCCTGTG
AAGGCTAAAAAGATTGTTCTCATACACGCTGCACACAACGAGCTTACGAACCTACCAAAA
GATCTTCGACAAATGCCGTCCCTGGAGTCTTTGTACTTTTACGATAACAATATAAAGTCA
CTTGATGGTGCTTTACAAAAATCGAGAAGATTAAAGACAATAAGTTTATCTTTCAATAAG
ATTGAATCACTAGCTGAAGATGAGTTTTCTGAAGCAGAAATGTTAGCAGATTTAGATATC
GGCTATAATCAGTTAAGATCTTTAAATGGCTCCTTAAGAGCCTTAAGATCACTTCGATAT
CTGAACTTGACTCACAATTTTCTTACTGAATTTTCTTTACAAGAAATCAAAGGCTTAAGG
GGATTAGCCGTTATTGACCTTTCTCATAATAAAATAACAAAAATTTCCGGCAGTATAGAG
AATTTGGTGGACGTTGAAACACGCGTAATGGAATTGCGGTTGAATCATAATCACATACTT
AATTTAGGCGGTGCTTTAATGGGCTTACGAGGGCTCTTGAGACTTAATTTAAGTCATAAC
CAATTACAAAAAATATCGTCTGATGATCTCATTGGTTTAGAAGACCTTCGATTACTTGAT
GTGTCTTACAATCATATAACGACAATGGCGGATACCTCAAAGGCATTTTTACCGTCACTT
GAAGAACTCATTGCTCATCACAATAATGTAACAACTTTGGATAAGGATTTCCACGGCTTT
CCATCACTCTGTATCGCAGATCTTTCTTATAATGAAATTCAGTCTGTTAACTATGAAGTT
GTGTCGAAATCGAGATGTACAATTAATGGAGTTCCCAGTATTTTGAAAATTTATCTTCAA
GGGAACCCTGTTCTCTGCGATGAGCGCCTGTACGAGTTAGTAGCTTTATTGGAGAATCTA
AATGCACGTGTCAGCGGCGTTTCAACCTGCGTGGCAGCTCAGACTTCAGCCCCAGTTTTA
ATGCGTGCCCTTAATGATATAGTACCAGATGCGCCAGTAATCGTTGTCACACACATGGGG
ACCGGGCTTCGAGTTTTGCAAAGAGAAATGCAACAGTCACAGCTTCCGTCAGCTTATCGC
CGCGTGGGGGCGCTCATTGGACACGTTTTACCGGAGAGAGAAGGTGGATTGCCTGTCCTG
GTTGAGCCACCAGTCACGCTCCCACCGTCTAACACCAATGTGGTAGTTAAATGGCCGGAT
GTCAAGCGGGAACAGCCACACCCTCTTGCCGATCACCTTCGCCTTCGTGACCTAAACTCT
TCACCGCAGTGA
Protein sequence:
MPRHVLRHLPHVKTVDLCRNKITKLTEEDFKDIQEVEHLLVADNQISKIERHAIPKRLKH
AHLGVNKLNSLNGALRDLDSLDWIFINANHLKSIDNELPVKAKKIVLIHAAHNELTNLPK
DLRQMPSLESLYFYDNNIKSLDGALQKSRRLKTISLSFNKIESLAEDEFSEAEMLADLDI
GYNQLRSLNGSLRALRSLRYLNLTHNFLTEFSLQEIKGLRGLAVIDLSHNKITKISGSIE
NLVDVETRVMELRLNHNHILNLGGALMGLRGLLRLNLSHNQLQKISSDDLIGLEDLRLLD
VSYNHITTMADTSKAFLPSLEELIAHHNNVTTLDKDFHGFPSLCIADLSYNEIQSVNYEV
VSKSRCTINGVPSILKIYLQGNPVLCDERLYELVALLENLNARVSGVSTCVAAQTSAPVL
MRALNDIVPDAPVIVVTHMGTGLRVLQREMQQSQLPSAYRRVGALIGHVLPEREGGLPVL
VEPPVTLPPSNTNVVVKWPDVKREQPHPLADHLRLRDLNSSPQ