| New model in OGS2.0 | DPOGS200907 |
|---|---|
| Genomic Position | scaffold5:+ 116735-156461 |
| See gene structure | |
| CDS Length | 3213 |
| Paired RNAseq reads | 547 |
| Single RNAseq reads | 1404 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000675 (8e-46) |
| Best Drosophila hit | CG40146, isoform C (1e-71) |
| Best Human hit | sodium/potassium/calcium exchanger 5 precursor (9e-56) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC013320 [Tribolium castaneum] (3e-103) |
| Best NR hit (blastx) | potassium-dependent sodium-calcium exchanger, putative [Aedes aegypti] (3e-100) |
| GeneOntology terms | GO:0016021 integral to membrane GO:0055085 transmembrane transport GO:0030318 melanocyte differentiation GO:0016020 membrane |
| InterPro families | IPR004481 K+-dependent Na+/Ca+ exchanger-like IPR001873 Na+ channel, amiloride-sensitive IPR004837 Sodium/calcium exchanger membrane region |
| Orthology group | MCL18399 |
Nucleotide sequence:
ATGGAGGATCTTAGTGTGGTTGAAAGGTGCGTGTGGGCAGGGGCTGTGGTGATCAGCATA
CTTTGCGCTGCATTCTTCGTGACCACAGCTTACAGCTGGTACGCGAGAAACCCCATCGCC
ACCGTTATAGAAAGTACTCAAGGAGCAATATGGGATGTTCCATTTCCGGCTGTGACGATC
TGCGACCTCAATATGATTTCACGGAGAGCTGCGAGAGATTTGTCAAACGTCTTGACCCTA
CCCGAAAATGTAACAGCTGATTTTGTTTTCAAAACATTAAAAGTAGCCCCGCTTTTGCAT
TCCTCAAACATGGCCGATCCAATACAAAAAAGGGATCTCCACATTCTGCAAGACGTTCTG
GATCTTAATAACATCACGGTCGAAACGCTTTTTAAAAAATTGTCTCCAGCTTCATCCTGC
GGAGACCTCTTAGAGCGGTGCATGTGGAAGAATACAATATATCATTGCGATCAGATCTTT
CAGCATGTATTCAATACAGTCTTACTTTGTTGTACCTTCAATTACTATGCTTTGGACCAG
CCGAGTAACGAACTGATGATATTTCGTCATTCGACTCCAAGACGCGTGGCTTCCTGCGGC
TATCAGACAGCGCTGACGGCTATTTTGAAAACTAACCCAAGTGACTACTACAGCACTAGC
GTAGCATCTTTAGGTATACTGGTCTTTATAGACAATCCATATAATGTTCCTGACTTCGAA
TCACCAGTTCGTATGGTAAATCCGTCAACTGAAATGATGATTGCTGTGTCACCCGAACAG
ACGTACGCTACGCCTGGAACTAAATCATTTACACCTGATGAGAGACAATGTTACTACAGC
GACGAGATGACAAGGAACGACCTGGACAGAAAAAAATTTGAAGATGAAGGATTGGTGGAT
TTACTCGAAGAAAATTCATGTCAAACACTTCAAGAGCTGTCTACATCTTTGGAAGTTGAA
TCATCCACGATAGGAAAACGCCTTAAAGCTTTTAAAATTTCCAAAAGGAAGAAAATTGGG
GTGAATAATGAGTCTGAGGAAGAAGATCCAAGAACCTTGAATTTGATCAAATGTTTACCA
GAATGTGAACATTTTGATTATCCTCTGGAGGTGGCCCTTGGCAAGCTATTTGTGAACGTG
CCTCTTGGAGTTACATCCTTTTATGAAGGTATCAATTTGGAAAATCGATCAGTTCTCAAC
GTGTTCTTCAATGATTTAGTCTCTACTAAATACAGACGAGAAGTTTACTTGAACTGGCAG
AATATTTTAGCCGCGTTTGGTGGTCTCTTGAGTTTGATGCTGGGTTTCACATTAATAGCG
GGATTCGATTTCATATTGTTTTTTATATTGAAAGTGGCTTACGACTTTTTAATTAAATGT
TTTAAAAATGATTCCAAACCGACTAACAGTCATATAATCAACGTGGAAGAACATAAAAAA
GAAAGATGGATAAATAATACTAGAAGAAAGAAAAACTATTCGGAACACGGAAAAATTGTT
CATAATGAAAACCCTCCAGTTGTGGCACATTGTACGGACGATAATAATATTATAAATAAA
AACGAAGAATTCGAATCAATTAAGCATAGCAAAATCAAGATGAATCTGACCCCGTGTTTG
TCAAGTCCGGTAGCGGTGGTTATTTCAATTATTTTCATTTTCTCGTCTTCGGCTGTGGCG
CTTGAAGATTTCAATGTGACCGATGATAATTATATGACGGTGGACAATGGAAACGGCGAG
ACAGTGTATATTACTAGGGATCTTATGAGAAGGTTGAAGGAGGAATCGGAGATATGGCAC
TGGAGACCCTGGCTGCGGACGAAGACCGAGATGGTTGGGAATGTCATTCTGGAGGTTGAA
CGAGTCAATGGAAACTCAATGAGAAGTTTTCCTGAGGGCGTTTTTGATGATGATCAATTG
CGGCAAGGTGCATTTATAGCATACGTGTTATTTGGAATTTACTCATTTACTCTATTGACC
ATAGTATGTAATGATTATTTCATCCCATGCGTGGAACTGATTTGCGAAAACTTAAAAATA
CCACAGAACGTGGCTGCAGCTACTTTCATGTCAGTAGCAACTTCGTGTCCAGAGTTCTTT
GTGAATGTCATTTCAACATTTTTAACGCAATCCGATATGGGCATAGGAACTATTGTGGGT
TCAGCTATATTTAACCTCCTTGGTGTAGGAGCTATTGGCAGTCTAGCAGCTATTGCGCCT
ATTGCAATCGAACGCTATCCTGTTACGAGGGATGTCATAATTTATATGATTAACGTCTCG
GTATTGGTCGCCATTGTCTGGGATGGTCAGATTGTATGGTACGAAGCTATGGTGTTGGGA
ATACTCTATGTAGTCTATTTCATCTTCATGTTCAACAGCATAAGGGTTAAGACAGTACTT
GAAAGGCTCTTTGCCTGCTGCTGCAAACGAAATTCCAGATACACAATTTCCGAGAAAGTT
GCTGAAGACGGCGTTACCAACAAAGCATATGTCAACTCACAAATGCAAATAAATAATGTC
AATATTGTCAATGATGAAAAGGCTGCGGTTGAAAAAGAGATAGTAAATGAGAAACCGAAG
AAAAGTGTTTTTCGTTTTCCTAAAGAAAAGGGTATTGTCTACAAAATATGGTGGGTGTAC
ACTTGGCCTATAAGGTTAATCCTGGGTCTGACGATACCATCACCCGTGTCATGCAAGCGT
TACTATCTTCTCACTTTCATTATGTGCATAGTTTGGATTGGCGTAAACTCTTATTTTGTA
TCATGGAGCATGACGGTTTTGGGTAACACATTTTTAATTCCTGAGTCGGTGATGGGGATG
ACTTTCCTGGCTTTCGGTGGCTGTTTGCCTGAAGCGTGTTCAATATTTATAATGTCAAGA
AAAGGTGAAGGAGGAATCGGAGTTTCCAATGCTTTAGGAGCGAATTCTTTATCTATATTA
TTTGCTCTCGGTCTTCCCTGGATCATTAGAACCTTTACTCTCCTCGCTCAAGGAGCGGAC
ACGGCAGTTTACATCAATTCATCGGGGATAGATTTCGTGGTCGGTTCCTTATTAGCCGCC
GCTGTATTGCTATGGATCACTTTATGTATTGGAAAGTTCAAACTGCGAAGATGTGTTGGA
GTCGTGTTACTCGGCCTATACGCACTTTTCATAACATTCGCTATTTTAGTTGAAATGGGC
ATAATTGCTGGCTTTTCAGATTTCACCTCGTAA
Protein sequence:
MEDLSVVERCVWAGAVVISILCAAFFVTTAYSWYARNPIATVIESTQGAIWDVPFPAVTI
CDLNMISRRAARDLSNVLTLPENVTADFVFKTLKVAPLLHSSNMADPIQKRDLHILQDVL
DLNNITVETLFKKLSPASSCGDLLERCMWKNTIYHCDQIFQHVFNTVLLCCTFNYYALDQ
PSNELMIFRHSTPRRVASCGYQTALTAILKTNPSDYYSTSVASLGILVFIDNPYNVPDFE
SPVRMVNPSTEMMIAVSPEQTYATPGTKSFTPDERQCYYSDEMTRNDLDRKKFEDEGLVD
LLEENSCQTLQELSTSLEVESSTIGKRLKAFKISKRKKIGVNNESEEEDPRTLNLIKCLP
ECEHFDYPLEVALGKLFVNVPLGVTSFYEGINLENRSVLNVFFNDLVSTKYRREVYLNWQ
NILAAFGGLLSLMLGFTLIAGFDFILFFILKVAYDFLIKCFKNDSKPTNSHIINVEEHKK
ERWINNTRRKKNYSEHGKIVHNENPPVVAHCTDDNNIINKNEEFESIKHSKIKMNLTPCL
SSPVAVVISIIFIFSSSAVALEDFNVTDDNYMTVDNGNGETVYITRDLMRRLKEESEIWH
WRPWLRTKTEMVGNVILEVERVNGNSMRSFPEGVFDDDQLRQGAFIAYVLFGIYSFTLLT
IVCNDYFIPCVELICENLKIPQNVAAATFMSVATSCPEFFVNVISTFLTQSDMGIGTIVG
SAIFNLLGVGAIGSLAAIAPIAIERYPVTRDVIIYMINVSVLVAIVWDGQIVWYEAMVLG
ILYVVYFIFMFNSIRVKTVLERLFACCCKRNSRYTISEKVAEDGVTNKAYVNSQMQINNV
NIVNDEKAAVEKEIVNEKPKKSVFRFPKEKGIVYKIWWVYTWPIRLILGLTIPSPVSCKR
YYLLTFIMCIVWIGVNSYFVSWSMTVLGNTFLIPESVMGMTFLAFGGCLPEACSIFIMSR
KGEGGIGVSNALGANSLSILFALGLPWIIRTFTLLAQGADTAVYINSSGIDFVVGSLLAA
AVLLWITLCIGKFKLRRCVGVVLLGLYALFITFAILVEMGIIAGFSDFTS