New model in OGS2.0 | DPOGS200910  |
---|---|
Genomic Position | scaffold5:+ 334971-339131 |
See gene structure | |
CDS Length | 495 |
Paired RNAseq reads   | 217 |
Single RNAseq reads   | 938 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010016 (5e-53) |
Best Drosophila hit   | dodo (3e-53) |
Best Human hit | peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (1e-44) |
Best NR hit (blastp)   | rotamase Pin1 [Bombyx mori] (3e-66) |
Best NR hit (blastx)   | rotamase Pin1 [Bombyx mori] (9e-67) |
GeneOntology terms    | GO:0003755 peptidyl-prolyl cis-trans isomerase activity GO:0005634 nucleus GO:0007173 epidermal growth factor receptor signaling pathway GO:0005515 protein binding |
InterPro families    | IPR001202 WW/Rsp5/WWP IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type |
Orthology group | MCL12857 |
Nucleotide sequence:
ATGGCTACTAGTAATGAAGATACTTTGCCAGAAGGATGGGAGGCCCGTAAGAGCAGAAGT
ACAGGTATGACGTACTATCTGAACATGCATACCAAGAAGTCACAATGGGATAAGCCAGAC
GAGCCGGCACCATTGGTTGATGAGGGTGATGATACACCCTCGCTAGTCCAATGCAGCCAT
TTGCTGGTGAAGCATAGTGGCAGCCGTCGCCCGTCCTCCTGGCGCGAAGAAAACATTACT
CGTTCTAAGGAAGAGGCTATGGAGATTTTGGCGGACTATCGGCGCAAGATCGTTGAAAAG
GAAGCTACCTTCGAGGAGCTGGCTCGCAAGTTCTCTGATTGTTCTTCAGCTAAGCGTGAT
GGAGATTTGGGTAGATTTGGCAAGGGGCAGATGCAGAAACCGTTCGAGCAAGTCGCCTTT
TCTCTGAGACTTGGCCAGCTCAGCCAGATCGTCGATACTGACTCTGGAGTGCACATCATT
CTCCGGACCGCTTAA
Protein sequence:
MATSNEDTLPEGWEARKSRSTGMTYYLNMHTKKSQWDKPDEPAPLVDEGDDTPSLVQCSH
LLVKHSGSRRPSSWREENITRSKEEAMEILADYRRKIVEKEATFEELARKFSDCSSAKRD
GDLGRFGKGQMQKPFEQVAFSLRLGQLSQIVDTDSGVHIILRTA