| New model in OGS2.0 | DPOGS200913 |
|---|---|
| Genomic Position | scaffold5:+ 436801-445656 |
| See gene structure | |
| CDS Length | 3570 |
| Paired RNAseq reads | 90 |
| Single RNAseq reads | 242 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000681 (4e-32) |
| Best Drosophila hit | TweedleT (4e-12) |
| Best Human hit | ND |
| Best NR hit (blastp) | cuticular protein tweedle motif 1 [Bombyx mori] (2e-47) |
| Best NR hit (blastx) | cuticular protein tweedle motif 1 [Bombyx mori] (3e-42) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR004145 Domain of unknown function DUF243 |
| Orthology group | MCL10002 |
Nucleotide sequence:
ATGGCCAAAGATACAGATGTATTAAAGACCTTTATTCAGCAAGACGAGAATTCTAAATAC
AAGATCCATGCAATGAGCTTAGAAATGCAGAATGAGTGGCTACATATAGGAGATTTTTGC
ATCCCATTAGCACTAAAATGGCGTACTTTAATTCATGATTGGTCGCCAGAACTGCTAAAA
TTTTACCTCAATGCGTTCCAGATGACTCTCCCAGATCAAAGTAATTTAGCAAGATGGGAC
AAAAGTACCGAAAAAACTTGCTACATCTGCGGGGAGGCAGTTGGAACTGATAAGCATTTG
CTGGTGGGATGTAGGGTACTCCTGGAAAGCGGTCAAAACTCGCGTCATCACGATAGGGTT
TTAGAACTCATTGGTGAAGCGGTTAGTCTATCGGTAGCAAGAGCGCAAAAAGAAATAACC
ACGAACCAACGATCAATAGGTTTTGTGAGAGAAGGCACCAGGCCTACAAAATCAAACGTC
AAGCCTTACTCTATTAATAAAGCGTCTTCGGATTGGACTTTAATGATGGACACTAGGAGC
GAGGGTATAACAGACAAATCTCTCTACAACCTGCTAAAAGACTTAGGCCTGCCAAGAACT
AACATCAGTTCATTCTTGGAACGTGAGTCGAAGGCAGCCCTAGCAGGTTCGTTTCATATT
TGGTTAGGTAGAGAGAGGAGCTTGGACAGTGGAGAGGACTTCGCGGCCAGCGTGTCTATT
ATGTATACTATTTGGGTGTTAACGCTCGCCTTTGGCGTAGCGGTAGCAGACGTCAGTCTA
GGATACCAATACAAAAAACCAGCAACAGTTTATGGATTACCTTCTAACTTTGGAAGCCAC
CAGCATAATTACAATGCAGCTTACTCTGGATCCAGTTCAGGCTCTGGGCACAACAATAAT
GTACCTTCAAGTGGCCACTACCAAGGAATAAACTCGATTGGCTCTTCTAGCTTTAACTCT
GCTTCTAATTACAATACACATGGCATAGGTGCAGGATCAACTTCTAGTTCTAAATACAAC
GCTATCGGAAATTCAGGTGCCGGAACAAACGCCGCCTCCAATTATAACGTAATTGGAACT
TTAGAAAATGGTTCAAGCTCAGGATCTAATTACGACATAATTGGTACTACTATCGGAAGT
AGTTTGGGTTCTGAATCTAGTTACAATCTACACGGCAATTCTAATTCCGAACCAAACTCC
AAATATTACGGATCAACTGCTAACCACAATAACCAAGATTATAGTCATTCTAATTTTGCC
TCTTCTTCAAACACAGGGGCTAATCAAAACGTTTACGGTACATCGAGCGGAGTATCTGGA
TCGAATTATAATAATCATGGTTCCGGAAGCGGATCCAATTATAACATCTTAGGTAACCAA
GGATTTAACCAAGGTTCAAATTCAGCCCACAATGCCGGTTATCAAACAACCTACCACAGT
GGCGATACCAGTGGCTTAGATAATATTGGTAACTACTATCAGAGTGCTAGTGCTGCAAAC
CAATTCATTTCTTCAAATCAATATCAATCCTCTGCAGTTCACAACTACCAAGATCACTAC
ACTCAAATACAAAGACAACCAGCACAAATATTTAAGCATTTTTACGTACATGCTGCACCA
GAAGACCCTGAGCCACCAAAGCCACGTCAACCTATTGTACTGCCGCCACCACAGAAACAC
TACAAGGTTATCTTTATTAAAGCTCCTTCACAACAGCCTGCAGCACCACAGATTATTCCC
GTTCCACAACAAAATGAAGAAAAAACTATTGTTTACGTATTGGTTAAAAAACCTGAAGAC
GCCAAGAACATCGTTTTGCCGAAGTTTGAACAGAAACCGCCCGCTAAACCTGAAGTATTT
TTCATTAAATATAACAACAAACAAGATTCTCAAAGTTTAATCGATAACATTGTCAATGAT
TACAACAAAGGAGGAGTTTCAGCTTCGTTTTCTGGTGCCGGTGTATCAGGTCCAGGAATT
AAAGCGCAGAACACTTACACGACCTCTGTAAATGGTGGAATCAATCAAGAATCTGAAAAA
GTGTCTTCTGGTTCCCTAGATTCAATTTCGAATATCAAACCTTATGTTCAATCTGAAAAC
TCATACGTAGCAGGCAGTTCTTCTTTAAGTAATGGAAACAGTCAAGTCTCGGGAGGGTCC
GCTTCAGGCAGCTATGAATCAAATTTTGGAAGTAAACCAAGTAGTTCTTTTGGATCTACA
TCTAAATTCGTATCTACTCTGAGCAACAAGTTTGGTTCCGGATCTTCTTCATCAGCTTCT
GGTTCATCCCCTAGTAGTGTCTTCTCAAACAGCGGTCTAGATAAATACTCTTCTAAGCCT
ATCTCTTCCCTTGGATCAAGTACTACAAACAAAAATTCGGGTATAAGTTATTCAACTTCA
TCAGGTGAAACAAACATCAAACCCTCATCAGGATTAGGAATAGTTGGTTCCTCTAATTCT
GGAAATAATCTTTCGCATGGTTCTGTTTTAGGCTCTGGTAGTCATGACTCAAGTACAAAC
AGCTTTTCTTCTGGTGCAAACCACTTCGACGCATTCTCTAATAGGTTTGGATCAGGTAGC
AGCCAAGCAGCAGGTTCAACTGCCCCCTCAAGCGTTGCAAGTACCTCCGCTCCTGTGTCA
AATTTGGGTGTAAATACAGCATTAAATTCAGGTGCCAGTAGCTTTGGCTACAGTTCCTCC
AACATTGCAAACAGTCAATCTCATAGCTCCAATCTTGGTTCTGGAAGTAACCATGTTAAC
TCCGGTGCTAGTAGTTTTGGAACAGCTAATAGTTATGCTGCTAGCTCAACGGTTTCGCCT
AGCGCAGTAAGCACTTTGTATCCTTCTTCAAACTTTGGTGTTAATTCAGGTAGTCTAGGT
TCCAATGTTGGGTCAGCTTCCAGTGGTTTTGGTTCCAGTTTCAGCACAAGCTCTAGTAGC
TACGGATCAGGTAACAATTATGCAAGCAGCACAACTGTTGCACCTGGTATTGCAAACACA
TATTCTCCTGTTTCAATCTTAGATACAAACACAGGTTTGAATTCCGGATCCAATGGTTTT
GGCTACGGTTCTTCTAAGATTGAAAATAGTCCGTCCCATGGTGCCAACGTAGGCTATAAT
AAATTTGGCTCAGGCTCTAACAATCTCAGCTTTGGTTCTAGTAGCCAAGGATTAGGAAGT
AGTTATGCTGCTGGTTCAACAGTTTCTCCTAGTACAGTAAGCACTTTATCCCCTACTTCT
AGTTTTGGAACAAATTTAGCTAGTTTGGGTTCCACCGTTGGGTCAGGCTCTAGCAGCGCC
GCTTCTAGTTCAAGTCAACTTGGCTCCAGCTCCAGCAGCTTTGCTTCAAGTAGTACTTTC
TCACCTGTTTCTAACGTTAATACAAACTCTGGTATTTTTGGGTCAAGTGCGGTAGGTTCA
GGTCCGTCCAATTTTGGATCTCGCCCTAATAAGTTTAACTATAACAAAGATGTCTCATCT
TCTGGTATAAACTACGAAACTAGCATTTTATCGACAAGTCAAGGCGTCCCACACGAAACA
TACGGACCACCAAAATTCAAAGTATTTTAG
Protein sequence:
MAKDTDVLKTFIQQDENSKYKIHAMSLEMQNEWLHIGDFCIPLALKWRTLIHDWSPELLK
FYLNAFQMTLPDQSNLARWDKSTEKTCYICGEAVGTDKHLLVGCRVLLESGQNSRHHDRV
LELIGEAVSLSVARAQKEITTNQRSIGFVREGTRPTKSNVKPYSINKASSDWTLMMDTRS
EGITDKSLYNLLKDLGLPRTNISSFLERESKAALAGSFHIWLGRERSLDSGEDFAASVSI
MYTIWVLTLAFGVAVADVSLGYQYKKPATVYGLPSNFGSHQHNYNAAYSGSSSGSGHNNN
VPSSGHYQGINSIGSSSFNSASNYNTHGIGAGSTSSSKYNAIGNSGAGTNAASNYNVIGT
LENGSSSGSNYDIIGTTIGSSLGSESSYNLHGNSNSEPNSKYYGSTANHNNQDYSHSNFA
SSSNTGANQNVYGTSSGVSGSNYNNHGSGSGSNYNILGNQGFNQGSNSAHNAGYQTTYHS
GDTSGLDNIGNYYQSASAANQFISSNQYQSSAVHNYQDHYTQIQRQPAQIFKHFYVHAAP
EDPEPPKPRQPIVLPPPQKHYKVIFIKAPSQQPAAPQIIPVPQQNEEKTIVYVLVKKPED
AKNIVLPKFEQKPPAKPEVFFIKYNNKQDSQSLIDNIVNDYNKGGVSASFSGAGVSGPGI
KAQNTYTTSVNGGINQESEKVSSGSLDSISNIKPYVQSENSYVAGSSSLSNGNSQVSGGS
ASGSYESNFGSKPSSSFGSTSKFVSTLSNKFGSGSSSSASGSSPSSVFSNSGLDKYSSKP
ISSLGSSTTNKNSGISYSTSSGETNIKPSSGLGIVGSSNSGNNLSHGSVLGSGSHDSSTN
SFSSGANHFDAFSNRFGSGSSQAAGSTAPSSVASTSAPVSNLGVNTALNSGASSFGYSSS
NIANSQSHSSNLGSGSNHVNSGASSFGTANSYAASSTVSPSAVSTLYPSSNFGVNSGSLG
SNVGSASSGFGSSFSTSSSSYGSGNNYASSTTVAPGIANTYSPVSILDTNTGLNSGSNGF
GYGSSKIENSPSHGANVGYNKFGSGSNNLSFGSSSQGLGSSYAAGSTVSPSTVSTLSPTS
SFGTNLASLGSTVGSGSSSAASSSSQLGSSSSSFASSSTFSPVSNVNTNSGIFGSSAVGS
GPSNFGSRPNKFNYNKDVSSSGINYETSILSTSQGVPHETYGPPKFKVF