| New model in OGS2.0 | DPOGS200915 |
|---|---|
| Genomic Position | scaffold5:+ 465812-468576 |
| See gene structure | |
| CDS Length | 1107 |
| Paired RNAseq reads | 1248 |
| Single RNAseq reads | 3391 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000683 (2e-155) |
| Best Drosophila hit | CG32528 (4e-104) |
| Best Human hit | beta-parvin isoform b (7e-95) |
| Best NR hit (blastp) | PREDICTED: similar to parvin [Tribolium castaneum] (5e-152) |
| Best NR hit (blastx) | PREDICTED: similar to parvin [Tribolium castaneum] (3e-130) |
| GeneOntology terms | GO:0003779 actin binding |
| InterPro families | IPR001715 Calponin homology domain |
| Orthology group | MCL13625 |
Nucleotide sequence:
ATGACTTCACCGCGCCCTAAATCTCCCAGAACCCCGGTTTTACCTAAAAAAGAGGATAAA
GAGGAATCATTTTGGGATAAAATCGGCACAATTGGTCGTAAAAAGCGCATAAAGGAAGTT
CAGGAAGTTCAAGCAGAAGGCAAATATGCTATTGATTCACCTGGAAGTCCTACAGCTCCA
GAAATTCCTCCTGAGGAGTACAGCCTGTTGGACAATGAAGAAAGAGCGATCATTGAGCCC
CGCTCTCTTGAAGATCCGAGAGTGAAAGACTTAATTCAGGTCTTGATTGACTGGATCAAT
GATGAATTAGCTGCACAGAGAATTATTGTGAAAGACATTAGTGAGGATCTCTACGACGGT
CAGGTGTTACAGAAGCTGTTGGAAAAACTGACAGAGACGAAGTTGGATGTCCCAGAAGTT
ACACAATCTGAAGAGGGCCAGCGTCAAAAGCTCGCTATAGTTCTGAGAGCTGTCAATAGG
GTCATCTATGGAACTTCAAAGCCAGTACAGAAGTGGAGTGTGGATTCGATTCATTCAAAG
AATGTTGTGTCCATTTTGCATTTGTTGGTAGCGCTTGCTCGCTATTTCCGCGCACCGGTC
CGTCTGCCAGAAAACGTTAGTGTCAACGTGGTTGTTGTGAAGAAGGATGCGCCCAACCAG
CTCTCCCATAGGACTTATATTGAAGATATAACAACCACTTATGATGACCTTGGTATGAAG
TGCGAGAGGGATGCTTTCGACGCACTATTTGACCACGCCCCCGACAAACTGCAAGTTGTT
AAAAAATCACTAATCACATTCGTTAATAAACACCTCAGTAAAGTGAATCTCGAAGTTATG
GATCTCGATAGTCAGTTCCACGATGGTGTGTACCTTGTACTGCTTATGGGCCTACTGGAG
GGATATTTTGTGCCACTTTTTGACTTCCACCTGACTCCACAAGACTTTGATCAGAAAGTA
CATAATGTTTCCCTGGCATTCGAGTTGATGCAAGATGCTGGGTTGGCCAAACCCAAGGCT
AGATCTGAGGATATTGTGAACCTTGATCTTAAATCTACACTGCGTGTGCTGTACAATCTT
TTCACGAAATACAAGAACCAGCCCTAA
Protein sequence:
MTSPRPKSPRTPVLPKKEDKEESFWDKIGTIGRKKRIKEVQEVQAEGKYAIDSPGSPTAP
EIPPEEYSLLDNEERAIIEPRSLEDPRVKDLIQVLIDWINDELAAQRIIVKDISEDLYDG
QVLQKLLEKLTETKLDVPEVTQSEEGQRQKLAIVLRAVNRVIYGTSKPVQKWSVDSIHSK
NVVSILHLLVALARYFRAPVRLPENVSVNVVVVKKDAPNQLSHRTYIEDITTTYDDLGMK
CERDAFDALFDHAPDKLQVVKKSLITFVNKHLSKVNLEVMDLDSQFHDGVYLVLLMGLLE
GYFVPLFDFHLTPQDFDQKVHNVSLAFELMQDAGLAKPKARSEDIVNLDLKSTLRVLYNL
FTKYKNQP