| New model in OGS2.0 | DPOGS201644 |
|---|---|
| Genomic Position | scaffold763:+ 37056-43805 |
| See gene structure | |
| CDS Length | 1968 |
| Paired RNAseq reads | 81 |
| Single RNAseq reads | 243 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008126 (2e-08) |
| Best Drosophila hit | cuticular protein 56F (7e-08) |
| Best Human hit | ND |
| Best NR hit (blastp) | TPA: putative cuticle protein [Bombyx mori] (2e-54) |
| Best NR hit (blastx) | TPA: putative cuticle protein [Bombyx mori] (1e-58) |
| GeneOntology terms | GO:0008010 structural constituent of chitin-based larval cuticle GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | ND |
| Orthology group | MCL18314 |
Nucleotide sequence:
ATGCTCGAATTGTGGAAAAACGTTAAGACGAACAGCACTGACTCTAACATCATGAAGGTC
TTCGTATTCATGAGTCTTCTGTCTTTCACTCTGGCTGAGCCACCAGTCGGAGACGGTTAC
CCTTCATCACGATCAGCTCACCACCACGGCCATGGACACCAAGGATCGCTGACTCAAGAG
TATGGACTTCCAGAATTTGGAGCACGGAACCAACAGGAGTACGCTGTAACAGCTGCAAGG
TCTCAACCTTCACAAACATACGGAACCCCGACGAGGTCACCTATCTCTCGGGAATATGGA
ACACCCAACCTTCGGTCAGGACTCTCCCAGGAGTACGGCCCTCCCAGTTTCAGATCCGCT
CCATCATTACAATATGGAGTCCCTCATTCCCGCGGCCTGTCTCCACAGTACGGTCCTCCG
ACCAGTCATTCCTCTCCATCCAGCCAAGATTCATATAAACAAGACGTCGTTATCCAAAGT
GCTCGTTTGTCTCAAGACTTCGCGCCACAAGTCAAATCTGCTTCTCTCCCAAGCTTCAAT
GCCAGTGCTGATTTCTCCTCAGACTCGTATTCAGTTCCACCTCAAGGATCCTACGATTAC
AACCAGCTCGAACAACGCACTCCGTCCCAAGACTATGGAGTCCCATCTCAGAGAAGCAAT
GAACAGTCTCCCGCTAACAAATACGGTCCTCCCGGTTTGAGGAGTGCTCAGTCGTTTGGT
CAAATAAGAAAGCAAGCGTCTTCGGCTGGACTTAATGCCAAGACTTCATCTGTGACAAGA
AGCTTCCAATCATCTTTCGGTTCCAAAAACTCTGCGTCACCCACCTCTGGAACTCCCCGG
TCTTTGTCCGCTGTATATGGAGCTCCGAGTTCAAGGAACTTTAATTCTTATTCCCAAAGT
CCAAAGACCGTTTCTCAGACTTATCTGCCCAGTTCCCGTACTGTGTCTCAGTCCTATGGG
GTTCCGAGCGAGCGTGGAGTCTCAACTGAATACGGTGTGCCAGAAAATGATTTTAACTTA
AAGAATAGTGCTGAAATACCACAGTATGATCTTGCAAGATCTCCGTCTTCTCTATACGGA
GCGCCTGAAGCCCGCATGCCCTCAGAGCAGTACGGAACACCACAGCAGTATAGTTCCCAG
GACTCTCAAGGATACAACTATGACAGAAATGCTCTCGACGAACTTCTGAACCAAGAGCCA
GCTAACTATGACTTCGGCTACAAAGTGAACGACCTTGAGAGCGGCAGCGACTTCGGTCAC
TCGGAGACGAGACAGGAGAACAGGGCCGAGGGCTCGTACTTCGTGGTGCTGCCTGATGGA
ACCAAACAGGATTGTTTCTATCCAAACATCGTGCAGGCAAAGCCGGATGAGGCCATTCTA
CCAAGAGCCTTCTCCGTGCCTACACAAACTCAGACCGTGTTCGTGTTGTTCCTCGTCGGT
GCCGCGGCGTTTGTTTCAGCGGAGTCTCCAATATCGAAGAGCTATCTTCCTCCGCCACCT
CCGAGTGACGTCATCACCTTCTCTAGAGCAGCTTCATCGGGCCAGGACTTCCGAAGAATT
CAGGAGCTAGGAGACATGAGCTCGGGTCTAACACACGGAGACAACAACTTTGAAAGGATC
AGTTCTAGGGGTCAGGGTGTCGGAGACGACGCTACGGGAAGGGGTCCCTCACAGGAACCA
GCGGATCCGGCCAAGTATATGTTCGGTTACTCGGTTAACGAGCTGGAGGGAGCAGACTTC
GGTCACAGAGAGGAGAGTTTCGAGGAGAGGAGCCAGGGTCAGTACCGCGTGATGCTTCCA
GTCGGCAGAGGACAGGCAGTGGACGACGGAGCTGAAGGTCGCGGGTTCCAACCCCAGGTG
GCCTACAGGAGCTCGGGCGCCTCGGCTGGGGGCTCTGGCTACGACTCCTCACACAAGGAA
TACAACCAGGGCGGCCGAGAGGGGCGAGGGGGGCGCTCAGGATACTGA
Protein sequence:
MLELWKNVKTNSTDSNIMKVFVFMSLLSFTLAEPPVGDGYPSSRSAHHHGHGHQGSLTQE
YGLPEFGARNQQEYAVTAARSQPSQTYGTPTRSPISREYGTPNLRSGLSQEYGPPSFRSA
PSLQYGVPHSRGLSPQYGPPTSHSSPSSQDSYKQDVVIQSARLSQDFAPQVKSASLPSFN
ASADFSSDSYSVPPQGSYDYNQLEQRTPSQDYGVPSQRSNEQSPANKYGPPGLRSAQSFG
QIRKQASSAGLNAKTSSVTRSFQSSFGSKNSASPTSGTPRSLSAVYGAPSSRNFNSYSQS
PKTVSQTYLPSSRTVSQSYGVPSERGVSTEYGVPENDFNLKNSAEIPQYDLARSPSSLYG
APEARMPSEQYGTPQQYSSQDSQGYNYDRNALDELLNQEPANYDFGYKVNDLESGSDFGH
SETRQENRAEGSYFVVLPDGTKQDCFYPNIVQAKPDEAILPRAFSVPTQTQTVFVLFLVG
AAAFVSAESPISKSYLPPPPPSDVITFSRAASSGQDFRRIQELGDMSSGLTHGDNNFERI
SSRGQGVGDDATGRGPSQEPADPAKYMFGYSVNELEGADFGHREESFEERSQGQYRVMLP
VGRGQAVDDGAEGRGFQPQVAYRSSGASAGGSGYDSSHKEYNQGGREGRGGRSGY