| New model in OGS2.0 | DPOGS214011 |
|---|---|
| Genomic Position | scaffold11363:+ 7011-9300 |
| See gene structure | |
| CDS Length | 1953 |
| Paired RNAseq reads | 145 |
| Single RNAseq reads | 386 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014395 (9e-68) |
| Best Drosophila hit | ND |
| Best Human hit | piggyBac transposable element-derived protein 3 (9e-48) |
| Best NR hit (blastp) | PREDICTED: similar to hCG32740, partial [Hydra magnipapillata] (1e-79) |
| Best NR hit (blastx) | PREDICTED: similar to hCG32740, partial [Hydra magnipapillata] (3e-81) |
| GeneOntology terms | GO:0005044 scavenger receptor activity GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0016020 membrane |
| InterPro families | ND |
| Orthology group | MCL10014 |
Nucleotide sequence:
ATGGCGGCCCGGCGTAGCTCATCTGTGTTGACTAAGCAAACGCTACTAACTCGAGGTGGT
AGAATATTAGCTCTTGTGCCTGCTGAAAATGCACCCTCTGACGATAGCGAGCGCTCAGAT
GTCGAAGAGGAATTTCGTGTACGCACCCCGCTTTCTTCATTTTCTTCTCCAGCACCTTCT
ATTCATTCTTCCTTGGAAAGACTAAACATTGTAGATGATGACGAACATTACAACAGCGAC
AATGTTCCACTTACGCCTATTTTTCAAACAGTATATTCAAGTCCGTCTTTAGAACCAAAT
TGCAATAAAGTACCGGTGCTGAGTGATATTCCGTCACTCCCAACAACTCCTCTTACTCCA
GTAAATCCACCAAATCCAAAAACCAGATCCCGACGTCGTCAGCCCACCGTTCCTGTCCTG
AAAAGACCGAGACTAATGAAAAAATTTACTTTGAACTATCAGTGGAAAAAAGCCGTTTTT
CGACACAGAGCTATTATAGAAGAAGACTCCAATTATACAGATGTTCCGGATATATCAGCG
ATGGATTATTTTTATAAATTTTTTTCGCCAGACATTCTAACAGATATCGTAGAGCAAACA
AATTCTTACTCAATAGGAAACACTGGACGTTCACTTGGTTTGACGGAAGATGAGCTTCGC
GATTTTCTAGCCATACATATTATAATGGGGGTCGTGAATATGCCAGCATATACGGACTTT
TGGAGTTTACGATACAGGTATAACTTAGTAGCAGATTTGATGACACTAAAACGATATCAA
CAAATACGTCGCAATTTGCACTTCGTTGACAATAATATACAGGATTCCGACCGATATTAC
AAAGTGAGGCCATTTGTGCAGAAAGTAAGACAAAATTGTCTAGCACAGGAAAATGAACGG
AAGTTTAGTATAGACGAGATGATGATTCCGTATAAAGGAACCAAAGCTGGAAAACGCCGT
CAATATATGAAGGACAAACCCAACAAGTGGGGTTTCAAAAATTATGTCCGCGCCGGAGTC
TCAGGCATGGTATATGATTTTCTTCTTTATGGTGGCGAAGATACATTCAGATTTTACACG
TTTTCAGATAAGGAAGCTTCTATAGGTTTCGGAGGACGAATTGTAATCGCTTTATGTCAA
AGCATAAAATTCAAACCGGCTTTTGTTTTCTGTGACAATTTTTTTTCCTGCCCTGAGCTG
TTTTACATTCTACGCGAAGAATACGGTATATTTGGTTTGGGGACTATAAGAAACAATAGA
CTTAGAGGAGCAGAAAAAGTGTTGCCTTCAGAGAAAGAGATGAAAAAGAAGCCTAGAGGA
AGTTATTCACAAGTAGTGTGCAACAAAAATAGATTATCGGTAGTGAGATGGAACGATAAC
AAACCTGTTACCCTAATTAGTTCATATGTAGGCGTAGAACCTGTCGAAAAAATGAAAAGA
TACTGTAAGGAGACAAAAAGCAAAATCGATGTCGACTGTCCCCAAATAGTCAAGGAGTAT
AATAAACATATGGGGGGAGTCGACTTAGCCGACATGCTTATATCTCTCTATAAAACACCA
TTTAAAAGTAGGCGTTGGTACATAGGTATTTTTGTTCAAATACTTGACATATGCATAAAT
AATGCCTGGCTTTTATATAGGCGGGATCAAGCTCAATCAAGCAAGCAATATATACCTCTA
AAAGATTTTAGGTACGAAATATACGAAGGCCTGAAAAAATTTGGTCGTGCTGATAAAAAT
GACAAAGCCAGAAAAGGTGTGCCATCAGCTAACCCAGTGGAATCGTTACGATACGATGCC
ATTGGTCATTTTATGATAATGACCACTCAAGGCAGGTGCAAGCTATGTCAGAAGCTTACC
ACTGTATTGTGCATGAAATGCAAAGTGCGGCTATGTTTCGTAACAGGGAAGAATCCCAGA
AACTGTCAATTAGATTACCATGTAAAGGCGTAA
Protein sequence:
MAARRSSSVLTKQTLLTRGGRILALVPAENAPSDDSERSDVEEEFRVRTPLSSFSSPAPS
IHSSLERLNIVDDDEHYNSDNVPLTPIFQTVYSSPSLEPNCNKVPVLSDIPSLPTTPLTP
VNPPNPKTRSRRRQPTVPVLKRPRLMKKFTLNYQWKKAVFRHRAIIEEDSNYTDVPDISA
MDYFYKFFSPDILTDIVEQTNSYSIGNTGRSLGLTEDELRDFLAIHIIMGVVNMPAYTDF
WSLRYRYNLVADLMTLKRYQQIRRNLHFVDNNIQDSDRYYKVRPFVQKVRQNCLAQENER
KFSIDEMMIPYKGTKAGKRRQYMKDKPNKWGFKNYVRAGVSGMVYDFLLYGGEDTFRFYT
FSDKEASIGFGGRIVIALCQSIKFKPAFVFCDNFFSCPELFYILREEYGIFGLGTIRNNR
LRGAEKVLPSEKEMKKKPRGSYSQVVCNKNRLSVVRWNDNKPVTLISSYVGVEPVEKMKR
YCKETKSKIDVDCPQIVKEYNKHMGGVDLADMLISLYKTPFKSRRWYIGIFVQILDICIN
NAWLLYRRDQAQSSKQYIPLKDFRYEIYEGLKKFGRADKNDKARKGVPSANPVESLRYDA
IGHFMIMTTQGRCKLCQKLTTVLCMKCKVRLCFVTGKNPRNCQLDYHVKA