| Genomic Position | scaffold7919:+ 92-8311 |
|---|---|
| See gene structure | |
| CDS Length | 2472 |
| Paired RNAseq reads | 513 |
| Single RNAseq reads | 1416 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001833 (0.0) |
| Best Drosophila hit | Dicer-1 (6e-79) |
| Best Human hit | endoribonuclease Dicer isoform 1 (2e-58) |
| Best NR hit (blastp) | dicer-1 [Aedes aegypti] (2e-122) |
| Best NR hit (blastx) | dicer-1 [Blattella germanica] (3e-125) |
| GeneOntology terms | GO:0003725 double-stranded RNA binding GO:0016443 bidentate ribonuclease III activity GO:0030422 production of siRNA involved in RNA interference GO:0016246 RNA interference GO:0005515 protein binding GO:0004386 helicase activity GO:0005524 ATP binding GO:0035196 production of miRNAs involved in gene silencing by miRNA GO:0035087 siRNA loading onto RISC involved in RNA interference GO:0016442 RNA-induced silencing complex GO:0031054 pre-microRNA processing GO:0035195 gene silencing by miRNA GO:0042078 germ-line stem cell division GO:0005737 cytoplasm GO:0005634 nucleus GO:0045448 mitotic cell cycle, embryonic GO:0007279 pole cell formation GO:0033227 dsRNA transport GO:0007367 segment polarity determination GO:0048813 dendrite morphogenesis |
| InterPro families | IPR003100 Argonaute/Dicer protein, PAZ IPR000999 Ribonuclease III |
| Orthology group | MCL11509 |
Nucleotide sequence:
CTGCAAATACCCGCGTTCCCGATTTATACGCGTTCGGGAGAAGTACGTGTGAGAGTTTGT
TGCGCGCCCCACGCTGACGTGAGACTCACAGATACAAGGGTCACGAGAATAACACGCTTT
ATGGAGTTTGTTTTCTCGGACGTACTTCGAGTGCGACGCCGCGGCATGAAGCTGGCGGAC
ACTACTCACAATAACTACTACGTAGTTCCGACCGTTAAGAAAACAACATCCGATGGCGCC
ACATGGATAGACATAGACTGGCCTTTCTTAGACTTAATATATCAGCACACAGAAGAGAAG
AGATGTTTAGAAATAGAGAAGCCCATGTTGTGGGAAGAAGAGAAGAAGAAAGAGGAGAAG
AAGGGAAAGAAGATTGAAAATCCGCTGCTTAAACCAGGAGAGGTATTCGTGTTTGACGCG
GAGAAGTACAAGGAAGCGGTCGTGACGCCCTGGTATAGAAATCAAGATCAGCCTCAATTC
TTCTTGGTTGCGGAGATATGTTGGAACCTGACGCCGGAGTCGTCGTTCCCGTCAGCACAA
CACGCGAGTTTCCGCTCGTACTACAAGAGCAAATACGGCGCTGAACTGACACAGAGCAAT
CAGCCGTTACTCGACGTGGACCACACGAGCGCTAGGCTGAACCTGCTAACACCACGGTAC
GTGAATCGTAAGGGCGTGGCTCTACCTGTGTCGTCGGAGCGCACTCGTCGCGCGAAACGT
GATCGTCTCGATCAAAAACAGATTCTAGTGGCGGAGTTGTGTATGAGACATCCTTTCGCT
GCGCCTCTATGGTGCGCAGCGGTTGCGTTACCATGCGCTTTGTACCGTATAAACGCGCTA
TTGCTCGCTGATGAAGTGAGGCGTGCTGTGTCAAGGGACGTGGGAGTTGGGCAGCCTAGA
GATGACATATCATGGCCGCCGTTGGATTTTGGGTGGAGTTTAGCGGAGGTTCTGAGCGCT
GATTCTGACAAAGGGGATAAGAAAAAAGAAAATGAAATAAGCGATTGCTGTTCCAGAGAT
GGAGAAAAAGAGAGTATAAAAGAAACAGAAGAGAGACCGGAAGTCAAAGAGAAGACTATT
AATGATATCTTACAAGAGAAAGAAGACGCCGAAAACGGCTTCGAAATAGGCACCTGGAGT
AATGACATGGCGTCCTCAATACCTTTGGACGAGCTGATGGAACCCCTACCACCAAACGTC
ACATTCTGCACTTCAAGCTCCGGAGGTGCAAATTGGTCTGATCCCATAGACAAACCTAAA
AGCGATTTCAATCCTAGCCGAACGTTCTCTATGGCCGACAGTGATTGTTCTTACATGTCC
AGCGATTTCGACACCGACGATTCGAATATGTCCGACAGTGATGATGACACCGACACTAGC
GGCTTCTGCAGCAGTAAAAATACTAACGCGGCGATGGGAGTTAGGATAGAGTACAAAACC
GCTCACGAAGCTGAAGCTGTGGACATAGAACGTCGAAGGCCTATCGCGCCGGCCCCTCAA
CCGGATGCACTTGATGACGCTCGTGACTTGAAGGAATGGGGACAGGTGTTGAGGGAAGGG
ACCGCCCCAGAAGAGTATGTGAAGAAGTTCAAGAACGCAGTATTGAAACACGAAGCTGAT
ATAAAGGATAAAGGTTATTTAATTGACAAGGACACACCTATAGTTGAGCTACTTCCTGAA
ACTACGAAAGATTTAGACAAAACTAATAGTGAAATATTGAAAGTAACTGTTAGTAGTGAT
TCAAATTTAATGAACGGGGACGACACATCGACAATAGAAGTTTGTGATCCCGTTCATACA
CAGACTGATGATGTACAAATAAAAGATAAAATAGATAAAGATAAAAATATAACAGATTTC
ATAGACGACATATTTCCTTACGGTAATCTATTAGAAGTCGAAAACGGTCAAATAACATTA
GAATCGATAGAAAGAAACAAAAGATTATTATTAGCTGAAATAAAGAATAGTTTGAGTGAA
GAAGAGATGAAGAAGATGCAATGCTTCTCGATGAAAGACGTTGACATAGATTCGCCGGAC
TACGTTAATGAGAAAATAGTGAACGTTGGCTTCGATACCAACGAGAAATATATAGATAGG
GTCAATGATTGGAGTGAACGGGATTTAAAACCCTATTACCTAGACAGTAATGGTATTAAT
GGCAAGGAATTCGATTTCGACTCTCAGCCAGATCTGGAGGGACATCCGGGGCCCAGTCCT
AGTGTTATTCTCCAGGCTTTGACGATGTCGAACGCCAACGACGGCATCAACTTGGAGAGG
TTAGAGACGATAGGTGACAGTTTCCTGAAATTCGCCATAACAGCGTATTTGTATTGCGCC
CTACCCGCGGTGCACGAAGGAAAGCTGTCGCATATGAGAAGCAAACAGGTATTGGAATCT
AAGATTTTCGCGAGTATTCATTTAAATGAAACTAGTATTATTCGGATTTACTCCGCGGAT
TTTATTATTTAA
Protein sequence:
LQIPAFPIYTRSGEVRVRVCCAPHADVRLTDTRVTRITRFMEFVFSDVLRVRRRGMKLAD
TTHNNYYVVPTVKKTTSDGATWIDIDWPFLDLIYQHTEEKRCLEIEKPMLWEEEKKKEEK
KGKKIENPLLKPGEVFVFDAEKYKEAVVTPWYRNQDQPQFFLVAEICWNLTPESSFPSAQ
HASFRSYYKSKYGAELTQSNQPLLDVDHTSARLNLLTPRYVNRKGVALPVSSERTRRAKR
DRLDQKQILVAELCMRHPFAAPLWCAAVALPCALYRINALLLADEVRRAVSRDVGVGQPR
DDISWPPLDFGWSLAEVLSADSDKGDKKKENEISDCCSRDGEKESIKETEERPEVKEKTI
NDILQEKEDAENGFEIGTWSNDMASSIPLDELMEPLPPNVTFCTSSSGGANWSDPIDKPK
SDFNPSRTFSMADSDCSYMSSDFDTDDSNMSDSDDDTDTSGFCSSKNTNAAMGVRIEYKT
AHEAEAVDIERRRPIAPAPQPDALDDARDLKEWGQVLREGTAPEEYVKKFKNAVLKHEAD
IKDKGYLIDKDTPIVELLPETTKDLDKTNSEILKVTVSSDSNLMNGDDTSTIEVCDPVHT
QTDDVQIKDKIDKDKNITDFIDDIFPYGNLLEVENGQITLESIERNKRLLLAEIKNSLSE
EEMKKMQCFSMKDVDIDSPDYVNEKIVNVGFDTNEKYIDRVNDWSERDLKPYYLDSNGIN
GKEFDFDSQPDLEGHPGPSPSVILQALTMSNANDGINLERLETIGDSFLKFAITAYLYCA
LPAVHEGKLSHMRSKQVLESKIFASIHLNETSIIRIYSADFII