| New model in OGS2.0 | DPOGS210642 |
|---|---|
| Genomic Position | scaffold635:- 52342-63289 |
| See gene structure | |
| CDS Length | 3012 |
| Paired RNAseq reads | 2870 |
| Single RNAseq reads | 6906 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001804 (2e-30) |
| Best Drosophila hit | CG6654 (9e-17) |
| Best Human hit | zinc finger protein 431 (2e-18) |
| Best NR hit (blastp) | hypothetical protein BRAFLDRAFT_275668 [Branchiostoma floridae] (8e-24) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_66750 [Branchiostoma floridae] (6e-29) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0046872 metal ion binding GO:0008270 zinc ion binding GO:0005622 intracellular |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL39596 |
Nucleotide sequence:
ATGGAGGATAATTTTAAGAAAAGGTGTCGTAAGTCGAGGTTGGTGCCACGGGAATGCTTG
GATACCGATGACGAATATATAGCAGTTATGCAGGATGAAATAGAGGAGACCATAGCTCGG
ATGACGTCAAATTCCATCCTCAAGAAGCTGAATCAGAGAAGTGAAGACAATCTGAAGTTT
GATGTCAAAGTTGAAGTTGAGGAGGTGGAGGAACACCAGACGAACGATTTGAACATAACC
ATCGGTTCTGTCGTTAGTCTGAAGGGCACAGCCGATGATGCACTGGGCGCAGCTGATGAA
GAACAGAATCTACATGACATAGCCGACACGAAACTGCTGGTCCGTGAATACGACTTCAAA
GCTACAACTGTTATAGATGAGTTGAACAAAATGAAAAACATGACTAATATAGCCGATGTG
CTCATAGATGTGAGCGTCAGGAACTATTTTGGACGATATTTCTTTAAAGTCGATGCCGAG
GTTAAGGAAGCCAAGTTGCTGGTGGTCTTCGCCAAGTGGCAGACCTGGTGTAGGATGAAC
CCTGACGATAGAGACGCTCCTCTCCTGTACAAGTGCTATATATGCCGTCGATCTTGGTGG
CATTACCATGAATTCAGAGAGCATTTCCACTGTCACGACGATTTCAACTTGGATATAGAT
CAGTTCGGCCAGGAATGTATCGTATTCGCCTACAGCAAGGAAATACAACAGAACGACATC
AGCGTCACCGGAAACTGCTGGCGTTGCGGCAACGACTTCCTCTTCCACCAGAATAAGAGG
AGATACAAGAAGCTATACGACTGCTCCGGGTGCCTGGCTAAGTTCACGACCTGTTTGAAA
TTATCCAATCATGTGGGGGGCTGTAACTACTATAAGAGATCTCTTCAGGCTTTGGGCAAA
AACGTCTCTCAGATACACCCATGCGATGTTTGCCCAGTGAAGTGCTTCACTCAGACCGAT
TTGGCCGATCATATAAAAGACAGGCACTCGGTGAGATCGGATCTGCCGATAGTGACGAAT
CATCAAAAGTGCAGTCACTGCTCCCAGCCATGTGACGCCCTGACGCACGAATGCAAGAAC
CAACCGTATATAAAATGCTGTGAGCTGTGCGACAGGAAGTTCCACAGGCCTATAAACTAT
CAGATTCACGTGAAAAACAACAGAAACCAGTACAAATGCAAGGTCTGCGATGAACAGCTG
CCTGGACAGTGCATGGAGGTGAAGCATCTGATGAAGCACACCAACAACTTTGTATATCTA
TACAGGTGTCTGCTCTGTCCCTCGCCGGTGTACTTCAGCAAGAAGAATATGCTGGAGGAG
CACAACGACGCGCACCACCAGGAAAATAGTACGAAATATTTCTTTGACGAGGTCGTTGTA
CCAAAGTCGCTGATCAAAACGAAGATATTAATCAGCAGACCAAGGATAAGACGGAAAGAC
CAACTCAAGCCTATTAAACAAGTACAGAATAATGAGACGAAACCTCTCAGCATTCCATGG
ATGCACCGTGCGGGGGCCGGGTCCATGGGAGATGGAGGGGATACGGGTCAAACCCAGCAG
AACAACACCGAACACCTGGAAACTAACGAGGCTATGTACAACCTGGAGCCAGTGATCACA
ATAAAGAAGGAATTGAACGAAGATGACTTGATGAGAGAAATAAAACAGGAAGCCGAGGAG
CTGATGATCTATGATGGGATCGGTGATGAGATGGTGATCAAACAGGAGATAGTGGAACAT
GTGATACAAGTGTGTGAGTACGATGACATTAATGTGGGGATTAAAACCGAGCCGGCTGAT
GATGATGAAGTTACCAACGACGAATATCTCTTGGACATAAGAAACCTGGCTTACAACTGT
ACCAAGTTGTACAGCTGTAAGAAGTGCCTCTTCCAGGGTGTGCACCGGGAGTATATGGAA
CACCTCAAGAGCAAGTGCCTTCACCGCACAAAGTACTACTGCAGTAAATGCAAAACCACG
TACCTGACGATGAAGAGGTACCTGGTTCACTTCAGGAGGCACGGCTACGAGGAGAACACC
TGCCCCAAATGCATCAGGACAGTGGAGATGAGCCAGCTGATAGCGCACGTGTACCAGCAC
GTGAAGAACACCTTCATCGGCTGCCACTACATCAACGACAAGACCTTCAACAAGTGCTAC
CAGTGCAGGGAGTGTAGAGAGGTGGTGCAGTTCTGTGACTTCTTCAAGCACTGGGAGCTG
CATCTGGAACTGAAGACTGAAGACAGCGCTGGCAGGAACGACCTGGTGGAGAACAAACCG
CTGCTCAAAGAACTCATAGCGCTTCTCCTCGGCGACACCATGGACGTGTCCAAGGAGTTG
CATCCGAAGCAGTGCATCATGTGCCTGAAGCTGTTCTCCAGGAAGAACGACCTGAAGCGC
CACCTCATAGAACACCTGCTGAACGACGCGTACAGGAACAGGCAGAAGTATGAGTGTCTC
CGCTGCCAGATATGCAGCGTCGGCTTCAACAAGACGGACATTTACAAGCGTCACATGAGG
GACCACGGCTCGCTGCCTCTCTACAAGTGCGAGATCTGCGACAAGACCTTCAGTGACTCG
AGTAACTTCTCCAAGCACAAGAAAGTACACAACATGTCCGTGGTCATCTGTGACATCTGC
AAGAAGAAGTTCACCTGCAAGGCCATACTCGTCAAGCACATGGAGTTACACAAGATCCTA
AAGCCCATATCGTGTGAGTGCTGCTCGCGGGTGTTCCACTCTCCGTCGCTGTACAGGAAG
CATCGCCTGGGGAAGAACAGGTTCAAATGCCCCGCCTGCAAGGTGTTGTTCAACAAGCTC
AAGGACAAGTGGGATCACATGTGGCTGGAGCATAAGGAGAGGAAGTACATAGCTGATTGT
CCGATCTGCAAGAAATCCTTCAGGAAGTACCAGGACGTGAAGGTCCACATCAGGAGAGAA
CACGACGCCAAATACGTGTACAGGCCCGTGTTCCACAGAGTAAATGAAGAGGAGATTATA
GTGTGCGACTAG
Protein sequence:
MEDNFKKRCRKSRLVPRECLDTDDEYIAVMQDEIEETIARMTSNSILKKLNQRSEDNLKF
DVKVEVEEVEEHQTNDLNITIGSVVSLKGTADDALGAADEEQNLHDIADTKLLVREYDFK
ATTVIDELNKMKNMTNIADVLIDVSVRNYFGRYFFKVDAEVKEAKLLVVFAKWQTWCRMN
PDDRDAPLLYKCYICRRSWWHYHEFREHFHCHDDFNLDIDQFGQECIVFAYSKEIQQNDI
SVTGNCWRCGNDFLFHQNKRRYKKLYDCSGCLAKFTTCLKLSNHVGGCNYYKRSLQALGK
NVSQIHPCDVCPVKCFTQTDLADHIKDRHSVRSDLPIVTNHQKCSHCSQPCDALTHECKN
QPYIKCCELCDRKFHRPINYQIHVKNNRNQYKCKVCDEQLPGQCMEVKHLMKHTNNFVYL
YRCLLCPSPVYFSKKNMLEEHNDAHHQENSTKYFFDEVVVPKSLIKTKILISRPRIRRKD
QLKPIKQVQNNETKPLSIPWMHRAGAGSMGDGGDTGQTQQNNTEHLETNEAMYNLEPVIT
IKKELNEDDLMREIKQEAEELMIYDGIGDEMVIKQEIVEHVIQVCEYDDINVGIKTEPAD
DDEVTNDEYLLDIRNLAYNCTKLYSCKKCLFQGVHREYMEHLKSKCLHRTKYYCSKCKTT
YLTMKRYLVHFRRHGYEENTCPKCIRTVEMSQLIAHVYQHVKNTFIGCHYINDKTFNKCY
QCRECREVVQFCDFFKHWELHLELKTEDSAGRNDLVENKPLLKELIALLLGDTMDVSKEL
HPKQCIMCLKLFSRKNDLKRHLIEHLLNDAYRNRQKYECLRCQICSVGFNKTDIYKRHMR
DHGSLPLYKCEICDKTFSDSSNFSKHKKVHNMSVVICDICKKKFTCKAILVKHMELHKIL
KPISCECCSRVFHSPSLYRKHRLGKNRFKCPACKVLFNKLKDKWDHMWLEHKERKYIADC
PICKKSFRKYQDVKVHIRREHDAKYVYRPVFHRVNEEEIIVCD