| New model in OGS2.0 | DPOGS210655 |
|---|---|
| Genomic Position | scaffold635:+ 15324-16181 |
| See gene structure | |
| CDS Length | 858 |
| Paired RNAseq reads | 12 |
| Single RNAseq reads | 44 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001643 (2e-56) |
| Best Drosophila hit | CG12645, isoform B (2e-08) |
| Best Human hit | ND |
| Best NR hit (blastp) | lipopolysaccharide-induced transcription factor regulating tumor necrosis factor alpha, putative [Pediculus humanus corporis] (6e-11) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL007344 [Aedes aegypti] (1e-14) |
| GeneOntology terms | ND |
| InterPro families | IPR006629 LPS-induced tumor necrosis factor alpha factor |
| Orthology group | MCL39565 |
Nucleotide sequence:
ATGGATAATGAAAATGATAACCACAATATAGACAATAATCCAACGAATAGAGATGTACAA
ACGGAGGAAGATAACGATGATATATCGATTACATCTAAAGAAATCATGACTTATAAGTTA
GATGTAAGCCCAAATGGCGTCGACCCCGTTTATAATAACTGTTCTCCGAGATTCTCAAGA
GAGGGACCAAGTGCTCTCCCAGAATCTCCAGTCGTGTTTACCCAACCTCTGCGCATATTT
TCGAACGTACCATCACCAATGTCGTTAAACATGCCGACGTCCTCGCAGCCCCAATCTTTA
TTCTTGCAGGCTTTAGCCAAATTAAACACGAGCTCTATAAGTTTAGCATTCAAAAATATC
GACGACAAACTAAGATTCAATAACGATTCAGCTCTTAATAAAGAACTATCACCGCCCGAT
TCTTTGACTAGCGCGCCGCCGTCCTATTCATTTGTACTGCGGCAAATGGCTGCAAGGAGA
AGGCCTAGATTGATGGGAACTTTCTATCCATCACCGTCCTTCGTGCAGCACACACCTCCT
CCGAACTACGCTACGGCTTTCGATATCTACGTTGATAATCCCATTACGCAACCACCACCT
AGGATATATAATTTTGGATTTACGCCAATGCCTATCGTCTGCCCTCAATGTGGACACACG
GGGATGACAGTGGTTACCTGTAAAATAACGTTGTGTACCCATTTATGTGCAATGTCGTTA
TGTTTGATGTGTTGTTGGATATGTGCGCCCCTGCCATACGTCCTACGATCATGCAAAGAT
GTTTATCACTACTGCAGGAATTGTCGCAGTTATCTTGGAATGTACTGCCCCACCAGTCCA
GATAGTGCTTATACTTGA
Protein sequence:
MDNENDNHNIDNNPTNRDVQTEEDNDDISITSKEIMTYKLDVSPNGVDPVYNNCSPRFSR
EGPSALPESPVVFTQPLRIFSNVPSPMSLNMPTSSQPQSLFLQALAKLNTSSISLAFKNI
DDKLRFNNDSALNKELSPPDSLTSAPPSYSFVLRQMAARRRPRLMGTFYPSPSFVQHTPP
PNYATAFDIYVDNPITQPPPRIYNFGFTPMPIVCPQCGHTGMTVVTCKITLCTHLCAMSL
CLMCCWICAPLPYVLRSCKDVYHYCRNCRSYLGMYCPTSPDSAYT