| New model in OGS2.0 | DPOGS212175 |
|---|---|
| Genomic Position | scaffold324:- 46645-49761 |
| See gene structure | |
| CDS Length | 1494 |
| Paired RNAseq reads | 363 |
| Single RNAseq reads | 895 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006621 (0.0) |
| Best Drosophila hit | CG5087 (5e-66) |
| Best Human hit | ubiquitin-protein ligase E3B (8e-75) |
| Best NR hit (blastp) | PREDICTED: similar to ubiquitin-protein ligase [Tribolium castaneum] (3e-146) |
| Best NR hit (blastx) | PREDICTED: similar to ubiquitin-protein ligase [Tribolium castaneum] (9e-141) |
| GeneOntology terms | GO:0005622 intracellular GO:0006464 protein modification process GO:0016881 acid-amino acid ligase activity |
| InterPro families | IPR000048 IQ motif, EF-hand binding site |
| Orthology group | MCL11875 |
Nucleotide sequence:
ATGTTTTCTAAGACCATAACCAGTAAAGATTCGTTTTTGGAACAAACAAAGGCTGCAAGG
GAAGAACGTGCACTTGAAAAGAAACGGGAACAGTCAGCAATTAAAATTCAGTCTATGATA
CGTGGTTGGCTCGCTAAACAAAGATTTAATAAAATTATTCTATACGATTTTGATCAGCTA
TTGCCCGAATACGCAAGCCAGGGTTCCCAAGATGAACCCCAGCAACCAGAGTTGATCCAG
GCTTTGGATGTATTTAGATTAGCTTGTCGCCTTTTTCTTGTTTTTAAACAACAGAGGGAT
AAGAAGAGGTTTGAAAAGCTATGCAAATATATCGTTCAAAGCCTACACTCCGAATCAGTC
AAGATATCATATGTTGGCGTTTTTCTCAATAAAGAGTACAGTTTTCGTTGGATAGCTCAC
ATAAAGGATTTGTTATACAAATGCTGTCAATATCTTGAGGAACTGAAACCAGAATCACCT
CTGGACATGCAAAGCATTCTAATACACCTTCACACATTGCTAGCATTCACAGCTACAAAT
ACTTGGGCTTTGACGAGGCTAAAAAACTTTGAGAAACTTCGAGGAGGGATGACACAGTTG
TGCGCTAATGTTATGGGTTCATTGTTTCACAGAGGATATTATTTAACACTTAAGTCATTA
CTTCTTCGTGGACTATGCAGGGAAAAGGTGGCCCTAAAAAATATAGCTCTGACGGCAATA
GTTACATTGGCGTTACGACCATTAGTATCTGCTCAGTTCTCAGAAAAGCTACTCACTATG
TATATAATTCAAATACTATCTGTACCTACACTAGTTTTTCACATGCAACAGATATCACCT
GAGTCTATGGCAGCATTCCGAACACATTCTATGTTTGACAAGTGCATTGAGTTTCTAAGC
GCAGATCAGAACATGAGAATTGTATTTAATACATTGGAGGGGAACTATGCTTTGTGTTTG
TTGGCCAACTTGACACAGCTGGCCTATACAGAGAGGGATTACGCTCAGCCTTCAACATAC
TATCCAACTTTTGTGTTGGTAGTGTCACGTTTTCTAGATAGCTGTCAGCAGTACGTCGTC
TGCAAGAAGAGCAATCTTAGTAAATGGCATCCCATACTGGGCTGGTTTTCACAGAGTTTT
GATATGTATTTACCTCTCGCTATGGGGAATTTAAGGACACAGTTGTCATTGTTATGGGGC
GTACCAATGTTGAAGAAGTTACTTGGGGTCCCATTGAAGGAGATGTTGGAGGCCGGTGTG
TCGGATGAGGCTGGACCTTCGAATCCATCCACACCGTTACAGAGCAACCCCGCATCGTTT
ATAAGGAGAGCGATTGAGGCTAGGACTAACAGATCTAATTCGAATAAAAACTTCAGGAAG
CTGGGATCTCCGGATTGCACTAAAATTGCTCTCATATGCTCCATGTACCACACGGCTCTT
CATACAATGACTCAAGTTAAATTGGATATTTTGACTGGTGAGATGCTTATTTGA
Protein sequence:
MFSKTITSKDSFLEQTKAAREERALEKKREQSAIKIQSMIRGWLAKQRFNKIILYDFDQL
LPEYASQGSQDEPQQPELIQALDVFRLACRLFLVFKQQRDKKRFEKLCKYIVQSLHSESV
KISYVGVFLNKEYSFRWIAHIKDLLYKCCQYLEELKPESPLDMQSILIHLHTLLAFTATN
TWALTRLKNFEKLRGGMTQLCANVMGSLFHRGYYLTLKSLLLRGLCREKVALKNIALTAI
VTLALRPLVSAQFSEKLLTMYIIQILSVPTLVFHMQQISPESMAAFRTHSMFDKCIEFLS
ADQNMRIVFNTLEGNYALCLLANLTQLAYTERDYAQPSTYYPTFVLVVSRFLDSCQQYVV
CKKSNLSKWHPILGWFSQSFDMYLPLAMGNLRTQLSLLWGVPMLKKLLGVPLKEMLEAGV
SDEAGPSNPSTPLQSNPASFIRRAIEARTNRSNSNKNFRKLGSPDCTKIALICSMYHTAL
HTMTQVKLDILTGEMLI