| New model in OGS2.0 | DPOGS209180 |
|---|---|
| Genomic Position | scaffold1582:- 37358-38613 |
| See gene structure | |
| CDS Length | 645 |
| Paired RNAseq reads | 538 |
| Single RNAseq reads | 1344 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006641 (2e-103) |
| Best Drosophila hit | Rab-protein 4, isoform A (5e-90) |
| Best Human hit | ras-related protein Rab-4B (1e-82) |
| Best NR hit (blastp) | ras-related GTP-binding protein 4b [Bombyx mori] (2e-113) |
| Best NR hit (blastx) | ras-related GTP-binding protein 4b [Bombyx mori] (4e-103) |
| GeneOntology terms | GO:0003924 GTPase activity GO:0006897 endocytosis GO:0015031 protein transport GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction |
| InterPro families | IPR013753 Ras IPR001806 Ras GTPase IPR020851 Small GTPase IPR006688 ADP-ribosylation factor IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR005225 Small GTP-binding protein |
| Orthology group | MCL17074 |
Nucleotide sequence:
ATGTCTGAATCGTATGAATATTTATTTAAGTTTCTTATAATAGGAAGTGCTGGTACTGGA
AAATCGAGTCTTTTAAATAACTTTCTAGGGAATAAATTCAAAGAAGACAGATGCCATACT
ATAGGGGTAGAATTTGGGTCGAAAATAATAAATATTGGAGGCAAATCTACTAAACTGCAA
ATTTGGGACACAGCTGGCCAAGAGAGGTTTCGTTCAGTGACTCGTTCATATTATAGAGGA
GCTGCGGGTGCCCTTTTAGTATATGATGTTACATCTCGAGACTCATTCAATGCTCTAAGT
AATTGGTTGCGAGATGCTCGCACACTCGCCAGCCCTAACATTGTCATACTACTTGTTGGT
AACAAAAAAGATCTGGAAGGCTCTAGAGAAGTCACCTTTACTGAAGCTAGTCAATTTGCA
CAGGAAAATGAATTAATGTTCCTTGAAACGAGCGCCAGGACCGGAGAAAATGTTGAGGAG
GCATTCTTAAAGTGCTCCAAAACCATACTTGCTAAGATCGAAACCGGGGAATTGGATCCT
GAGAGGATAGGTTCGGGGATACAGTATGGGACGGGCACATCAAAGAAATTGGCGGCTCCA
AAAAAACCTGTGAAGCCTCCATCAGATTGCGCCTGTAACGTTTAA
Protein sequence:
MSESYEYLFKFLIIGSAGTGKSSLLNNFLGNKFKEDRCHTIGVEFGSKIINIGGKSTKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDVTSRDSFNALSNWLRDARTLASPNIVILLVG
NKKDLEGSREVTFTEASQFAQENELMFLETSARTGENVEEAFLKCSKTILAKIETGELDP
ERIGSGIQYGTGTSKKLAAPKKPVKPPSDCACNV