New model in OGS2.0 | DPOGS213506  |
---|---|
Genomic Position | scaffold1176:- 102111-103461 |
See gene structure | |
CDS Length | 1002 |
Paired RNAseq reads   | 126 |
Single RNAseq reads   | 491 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011786 (2e-120) |
Best Drosophila hit   | CG4623 (1e-50) |
Best Human hit | ganglioside-induced differentiation-associated protein 1 isoform a (2e-33) |
Best NR hit (blastp)   | PREDICTED: similar to ganglioside-induced differentiation-associated-protein 1 [Tribolium castaneum] (9e-70) |
Best NR hit (blastx)   | PREDICTED: similar to ganglioside-induced differentiation-associated-protein 1 [Tribolium castaneum] (2e-70) |
GeneOntology terms    | GO:0005737 cytoplasm GO:0005575 cellular_component GO:0032526 response to retinoic acid GO:0003674 molecular_function |
InterPro families    | IPR004045 Glutathione S-transferase, N-terminal IPR004046 Glutathione S-transferase, C-terminal IPR012336 Thioredoxin-like fold IPR010987 Glutathione S-transferase, C-terminal-like IPR012335 Thioredoxin fold IPR017933 Glutathione S-transferase/chloride channel, C-terminal |
Orthology group | MCL16715 |
Nucleotide sequence:
ATGCATTATGTACAAAAATATTTGGATAAATTGCAGGCACCAAAGTTAAATAACACATCT
TTAAGTAATGGATACAAAACAAATATATTTTTATATTGCAATTATTACAGCTTTTACTCT
CAAAAGGTTTTGATGGCACTATACGAAAAAAATATAGACTTCGAACCAATAGTTATAGAT
ATAACTAAAGGTGAACAGTATTCTCAATGGTTTCTGGAACTTAATCCTCGGGGAGAAATC
CCAGTTCTTAAAGTAAACAAATCCATTATTCCGGATTCCACCAGAATTTTAGATTATTTG
GAGATGTACCTGGATCAAGAGAACCCACCATTACTGGAGGTTTCTCAAGATCCGAAAGTA
ATGATGAACATTGTTAAGTTTCGGGAACTAATTGAAGCCCTGCCTGCTGGTGTAATTACT
GTGGGATCATTCTTCCATCCACATCTTTCTGGACGGCCCAAATTACCATTCATTTTGCCA
GTTAGAGAAGTGCTCAAAAGTGGTGATTTAAGTAATTCTAAAAATCTAAGAAGGTTAGCT
GAAGAAAATCCAAAGGCCAAGAGTGTTCTTCTATACAAAGCAGAGATACAGGATCGAAAA
CAAGAAATACTTACTAATGAAGAAGAATATCTTAAAATCATTAATATAGTTGATGATGTA
CTGTCACAAGTTGAAGAGCAGTTGAAAAAACAAAATGATGATAGTTGGCTTTGCTGTGAT
AAATTTAGTATTGCTGATATTAATTTGGCTGTGCTTTTACAACGTTTGTGGGAGTTGGGG
CTGGATGAGCGCTTTTGGGCATTCGGCAAACGCCCCTACATTGAGAATTACTTCGTCCGT
GTCAAACAAAGAGATTCTTTCCAAAAGACCATTCCTGGCCTACCGGTCCATGTTAAAATG
ATTTTAACATCACAACCGCCTATATATGTTGCTTCGGCGGGAATTGTGTCCATTTCTCTT
GTGATAACATTGGCATATCTTTTCAAAAAATTAATATGGTAA
Protein sequence:
MHYVQKYLDKLQAPKLNNTSLSNGYKTNIFLYCNYYSFYSQKVLMALYEKNIDFEPIVID
ITKGEQYSQWFLELNPRGEIPVLKVNKSIIPDSTRILDYLEMYLDQENPPLLEVSQDPKV
MMNIVKFRELIEALPAGVITVGSFFHPHLSGRPKLPFILPVREVLKSGDLSNSKNLRRLA
EENPKAKSVLLYKAEIQDRKQEILTNEEEYLKIINIVDDVLSQVEEQLKKQNDDSWLCCD
KFSIADINLAVLLQRLWELGLDERFWAFGKRPYIENYFVRVKQRDSFQKTIPGLPVHVKM
ILTSQPPIYVASAGIVSISLVITLAYLFKKLIW