DPGLEAN02732 in OGS1.0

New model in OGS2.0DPOGS213510 
Genomic Positionscaffold1176:- 27320-29922
See gene structure
CDS Length1059
Paired RNAseq reads  3980
Single RNAseq reads  15752
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA012539 (2e-49)
Best Drosophila hit  rhodopsin 3 (7e-113)
Best Human hitmelanopsin isoform 1 (2e-34)
Best NR hit (blastp)  UV opsin [Danaus plexippus] (0.0)
Best NR hit (blastx)  UV opsin [Danaus plexippus] (0.0)
GeneOntology terms







  
GO:0008020 G-protein coupled photoreceptor activity
GO:0007604 phototransduction, UV
GO:0009589 detection of UV
GO:0007602 phototransduction
GO:0004930 G-protein coupled receptor activity
GO:0016021 integral to membrane
GO:0007186 G-protein coupled receptor protein signaling pathway
GO:0016039 absorption of UV light
GO:0007601 visual perception
InterPro families


  
IPR000276 GPCR, rhodopsin-like, 7TM
IPR001760 Opsin
IPR000856 Opsin RH3/RH4
IPR017452 GPCR, rhodopsin-like superfamily
Orthology groupMCL16947

Nucleotide sequence:

ATGCTGATAGACGGTCTCACAGGCGAGGACCTAGCTGCAGTACCGGAGCACTGGCACACC
TACCCCTCTCCACCAGCCAGCGCCCACACGGCCCTAGCTCTCCTCTACTGCTTCTTCACA
GCTGCAGCACTCATTGGAAATGGAATGGTCATATTCATTTTTCTAACAACGAAGAGTTTG
CGGACATCTAGCAACTTACTGATTCTAAACCTCGCAATTAGCGATTTCATTATGATGGCC
AAAGCTCCAATCTTCATATATAATAGTGCATTGCGCGGCTTTGCTGCGGGACCCGTCGGT
TGTCAAATATTTTCCGTAATGGGTGCCTATAGCGGCATTGGAGCGAGTATGACCAACGCT
TGTATTGCCTACGACAGACATTCTACGATCACTCGACCACTTGACGGGCGACTGTCGCAA
GGGAAAGCTTTGTTGATGATAGCCTTTGTATGGATATATGCGACGCCCTGGTCACTTCTG
CCACTGTTCAAAGTATGGGGCAGATTTGTACCAGAGGGCTACTTAACATCATGCACGTTC
GATTACTTGTCCAATACTTTCGACACTAAATTGTTTGTGGCCTGTATATTCACTTGTAGC
TACGTCTTCCCTATGACCATGATTATATATTTCTACAGTGGCATTGTCAAACAAGTGTTC
GCACATGAAGCAGCATTGAGAGAACAAGCTAAGAAAATGAATGTTGAATCTCTGCGCTCG
AATCAAAACGCCTCCGCGGAGTCCGCTGAGATACGAATTGCTAAAGCGGCTCTCACCGTC
TGCTTCCTGTTTGTGGCGTCTTGGACGCCGTACGGGGTGATGGCGCTCATAGGAGCCTTC
GGGGATCAACGACTTCTCACACCCGGGGTAACTATGATACCAGCCGTAGCGTGCAAAACT
GTAGCCTGCATCGATCCTTGGGTTTATGCAATCAGTCATCCCAAGTACAGGCAAGAGCTT
CAGCGTCGCATGCCTTGGCTTCAAATCAATGAGCCCGATGATAATGTTTCAAACACTACT
AACGGCACTACCAATTCTACGGCTACGCCTACCGCCTAA

Protein sequence:

MLIDGLTGEDLAAVPEHWHTYPSPPASAHTALALLYCFFTAAALIGNGMVIFIFLTTKSL
RTSSNLLILNLAISDFIMMAKAPIFIYNSALRGFAAGPVGCQIFSVMGAYSGIGASMTNA
CIAYDRHSTITRPLDGRLSQGKALLMIAFVWIYATPWSLLPLFKVWGRFVPEGYLTSCTF
DYLSNTFDTKLFVACIFTCSYVFPMTMIIYFYSGIVKQVFAHEAALREQAKKMNVESLRS
NQNASAESAEIRIAKAALTVCFLFVASWTPYGVMALIGAFGDQRLLTPGVTMIPAVACKT
VACIDPWVYAISHPKYRQELQRRMPWLQINEPDDNVSNTTNGTTNSTATPTA