New model in OGS2.0 | DPOGS213620  |
---|---|
Genomic Position | scaffold1176:+ 21391-22869 |
See gene structure | |
CDS Length | 744 |
Paired RNAseq reads   | 206 |
Single RNAseq reads   | 558 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011682 (1e-40) |
Best Drosophila hit   | CG13890 (1e-36) |
Best Human hit | peroxisomal 3,2-trans-enoyl-CoA isomerase isoform 2 (4e-44) |
Best NR hit (blastp)   | crotonobetainyl-CoA-hydratase, putative [Aedes aegypti] (1e-50) |
Best NR hit (blastx)   | crotonobetainyl-CoA-hydratase, putative [Aedes aegypti] (1e-49) |
GeneOntology terms    | GO:0016853 isomerase activity GO:0005782 peroxisomal matrix GO:0005777 peroxisome GO:0000062 acyl-CoA binding GO:0006631 fatty acid metabolic process GO:0005739 mitochondrion GO:0004165 dodecenoyl-CoA delta-isomerase activity GO:0043231 intracellular membrane-bounded organelle GO:0005488 binding |
InterPro families   | IPR001753 Crotonase, core |
Orthology group | MCL11529 |
Nucleotide sequence:
ATGTGGTATAACATAAATGAAAATCTCAACATGTCAAATGATAAAATAATCGAAACGTTA
CAAGAAAACGTTCTCATTTTAAAACTCAATAGACCTAAGAAGAAAAATGCATTGGATATT
GACATGTTTGTACAAATCACGAAAGGCCTTAATAAAGCAGCAACTGACGAAAATATAAAG
ATCGTGGTTTTGACTGGAGCTGAGGACTTTTATAGCAGTGGTTTCGATTTGTCCTCGGAA
CGTGGGAATAATTTATATGTTGCATTGGAAGCGTTTATTAAATCGTTTATAACGTTTCCA
AAGTTGCTGATAGCGATTGTGAACGGTCCGGCTATCGGTATAGCGGCCACGACGTTGGCA
TTGTGTGATTTGGTTTACGCCTCTGAGAACGCATATTTTTACACGCCTTTTACAAAATTG
GGTGCGGCGGCAGAAGGATGTTCCTCAGTTACATTTCCGAGATTAATGGGCGAAAGAAAG
GCAATGGAAATGTTGATTCTAAATTATAAAATGCCGGCTATAGAAGCACTTGAATATGGT
TTCATAAATAAAGTTTACAAATTAGAGGAACTACAGAAAAAGTCATGGGAAACAATAAGA
ACTATTTTAAATCTTCCCCAACCTTCAGTGTTGTATACAAAAAAGTTGTTGAAGACAGCT
TCAGTGGAAGAGTTATTGAGAACCAACGAGATTGAATTATCTGTTTTACGTAAATTGAAT
GGTGTAGGAAAAAGTAAATTATGA
Protein sequence:
MWYNINENLNMSNDKIIETLQENVLILKLNRPKKKNALDIDMFVQITKGLNKAATDENIK
IVVLTGAEDFYSSGFDLSSERGNNLYVALEAFIKSFITFPKLLIAIVNGPAIGIAATTLA
LCDLVYASENAYFYTPFTKLGAAAEGCSSVTFPRLMGERKAMEMLILNYKMPAIEALEYG
FINKVYKLEELQKKSWETIRTILNLPQPSVLYTKKLLKTASVEELLRTNEIELSVLRKLN
GVGKSKL