| New model in OGS2.0 | DPOGS213627 |
|---|---|
| Genomic Position | scaffold1176:+ 104199-105530 |
| See gene structure | |
| CDS Length | 1332 |
| Paired RNAseq reads | 245 |
| Single RNAseq reads | 686 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011690 (1e-134) |
| Best Drosophila hit | YT521-B, isoform A (1e-77) |
| Best Human hit | YTH domain-containing protein 1 isoform 1 (1e-55) |
| Best NR hit (blastp) | PREDICTED: similar to YT521-B CG12076-PA, isoform A [Apis mellifera] (7e-109) |
| Best NR hit (blastx) | PREDICTED: similar to splicing factor yt521-b [Tribolium castaneum] (7e-104) |
| GeneOntology terms | GO:0008150 biological_process GO:0003674 molecular_function GO:0005575 cellular_component |
| InterPro families | IPR007275 YTH domain |
| Orthology group | MCL16217 |
Nucleotide sequence:
ATGGAGGTGTCCAATAACACCGACGCTGTTAATCTTGGCGTTGGTGAGGTTGAAGCTGAA
ATTGGTGAGGAATTAAAACAGTTAGAGGAAGGAAAAGACTACGACACTCGAAGTGAAGTA
TCGAGTTCGTCCTCGAGTGACTCGAGCACTCCAAGCATAAGTTCTGTTAGTACAGAAAAG
TCGAAACGCACCTCGAATCGTAAACGTACCAAGTCTGTGAGCCACTCTCCTGTCCAAACA
AAACGACGATGTGTAACATCTACAACCAACAAAATAAAAACATATGATTACATGACTAAA
CTTAATTATTTGTTTAGAGATACACGATTCTTTCTTATAAAATCGAATAATTCTGAAAAC
ATAACATTGTCGAAAGCAAAGGGTGTGTGGTCTACATTACCACAGAATGAAGCTAATTTA
AACCAAGCATATAGAGAATCAAGAAATGTTTTGTTAATATTTTCAGTAAAAGAAAGTGGC
AAATTTGCTGGTTTTGCAAGACTGGCAAGTGAGTCTCGCAGAGATGTACCGTCGATTTCA
TGGGTTTTACCACCCGGACTCTCAGCAAAAGTACTAGATGGTGTTTTTAAAGTTGACTGG
ATTTGTAGAAAAGAACTCTCCTTTAGTAGTACTCTTCATCTCTACAATCCCTGGAATGAA
GGGAAACCTGTAAAAATTGGTAGAGATGGGCAAGAAATAGAGCCTAAGGTGGCAGAGGAA
CTCTGTAGGTTATTTCCTGAAGATGAAGGTATTGAAATGACACCAATATTAAGAAAATCT
AAAGAGGCTTCTAAAAAGGCATATCTTAAAAGTGGTGGCAGCTACAGAACTTACAGAGCA
CCATTGTCTGCTAGAGGATCAGGCTATAGAAACCGTATGGGTTCATCAGGTAGAAATAGA
AGAAAAATTTTTACTTCACCCAGAAATAGATTAGGCTCTGCCGCCTTTAAGAGAAGATCC
CCTTCACCTTATATGAGGGATCGTTTACCATCATGGTTTGCTCGTAGTAGGGAAAGTTAC
AACAGTGGTGGATCTGCAGCAGCAGAGGCCTATGTTGCTGAATACATGCGGTCCATGCAC
CATCAACTGCCTCCATTGCCATATGTTCCACCACCTGGTTTCAGTGGTGCTCTTGCAACC
TATGACGGATTACCACCACCACCCCCGCCACCACGCTACTATGACCTACCAGACTATCCT
CGATCTGTACTGGTTTATGATAAAAGGTCATACGAGCGTTCGGTAGATGAATTCTTATGG
CGAACAACAGACCGCTCTAGTGGACGCAGCCGTGAACGAGATTCTCATAGATCTTATAGA
GATCGAAGATAA
Protein sequence:
MEVSNNTDAVNLGVGEVEAEIGEELKQLEEGKDYDTRSEVSSSSSSDSSTPSISSVSTEK
SKRTSNRKRTKSVSHSPVQTKRRCVTSTTNKIKTYDYMTKLNYLFRDTRFFLIKSNNSEN
ITLSKAKGVWSTLPQNEANLNQAYRESRNVLLIFSVKESGKFAGFARLASESRRDVPSIS
WVLPPGLSAKVLDGVFKVDWICRKELSFSSTLHLYNPWNEGKPVKIGRDGQEIEPKVAEE
LCRLFPEDEGIEMTPILRKSKEASKKAYLKSGGSYRTYRAPLSARGSGYRNRMGSSGRNR
RKIFTSPRNRLGSAAFKRRSPSPYMRDRLPSWFARSRESYNSGGSAAAEAYVAEYMRSMH
HQLPPLPYVPPPGFSGALATYDGLPPPPPPPRYYDLPDYPRSVLVYDKRSYERSVDEFLW
RTTDRSSGRSRERDSHRSYRDRR