| New model in OGS2.0 | DPOGS211867 |
|---|---|
| Genomic Position | scaffold127:- 299444-304054 |
| See gene structure | |
| CDS Length | 2223 |
| Paired RNAseq reads | 1875 |
| Single RNAseq reads | 5247 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001238 (0.0) |
| Best Drosophila hit | Cysteinyl-tRNA synthetase (0.0) |
| Best Human hit | cysteinyl-tRNA synthetase, cytoplasmic isoform b (0.0) |
| Best NR hit (blastp) | cysteinyl-tRNA synthetase [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | cysteinyl-tRNA synthetase [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0000049 tRNA binding GO:0004817 cysteine-tRNA ligase activity GO:0005737 cytoplasm GO:0006423 cysteinyl-tRNA aminoacylation |
| InterPro families | IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding IPR015803 Cysteinyl-tRNA synthetase, class Ia IPR014729 Rossmann-like alpha/beta/alpha sandwich fold |
| Orthology group | MCL13708 |
Nucleotide sequence:
ATGGCTAAAAGAACACAACCACCTTGGTCTTTGCCTTCCGGTGAAGAAAAAAGACCAGTT
TTAAATCTTTATAATAGTCTGACCCGACAGAAAGAGGAATTTGTTTGTGGTCATGGCAAT
CGAGTGAACTGGTATAGCTGCGGACCAACTGTGTACGACGCCTCGCACATGGGACACGCG
AGGTCATACATATCATTTGATATTCTGAGGCGAGTGTTGACCACTTACTTTGGGTATGAT
GTGTTGTATGCAATGAATATAACCGACATTGATGATAAGATTATAAAGAGAGCGAGACAG
AACTACCTGTATGAGAATTATGTCAAAGACACGAAAACATTGGACCAGATCGTGGACGAT
GCAACCGCAGTCATAGACTTCTATGAAGGTATCGTCAGAGACGCCAATGATCCCGATAAG
AAGAACACCTTGCAGAAGATGCTGGACAGTGTTGCTTCAGCCGTAAAAACTTTAAAATCA
GCACTTCAAGAAAGTAAATCTGATAAAATCGAAGAAGCAAAAAGTGATCTCTTAAAATCA
GCTAAAGATCCCATATCAGTCTGGTTGGATGAGAAGTACGGTGCGACCGTCACGGAAAAT
GGGATATTTCAAACACTGCCCCGATATTGGGAAAATGAGTTCCACAAAGACATGAAAGCT
CTCAATGTCCTGCCCCCCGATGTGTTGACCAGAGTCAGTGAGTACATTCCACAGATAATA
ACCTTCATCCAAAGGATCATTGACAATGGCCTGGCTTACGAGTCCAACGGTTCTGTGTAT
TTCAATGTGAGCGAGTTTGATGGCAAAGATAAGCATTACTACGCCAGACTCGTCCCCGAG
GCCTACGGGGACAACAAATCTTTGCAAGAAGGGGAAGGTGACTTAACCGATAGCACAGCC
GAGAAGCGCTCACTCAATGATTTCGCTCTCTGGAAGCAGAGCAAGACCGGCGAGCCGTCG
TGGGAGTCCCCGTGGGGTCGCGGCCGGCCCGGCTGGCACATAGAGTGCTCCGCCATGGCC
TCGGACGTGTTCGGAGACAACCTCGACATCCACACCGGCGGAGTGGACCTCAAGTTCCCC
CATCACGACAACGAGCTGGCTCAGAGCGAGGCTCACTTCGACAAGCCGGGCTGGGTGAAC
TACTTCCTCCACACGGGCCATCTCACGATAGCCGGCTGTAAGATGTCCAAGTCCTTGAAG
AACTTCATCACCATAAAGCAGGCTCTGGAGCAGCACTCGGCGCGGCAGCTGCGGCTGGCC
TTCCTGATGCACGGCTGGAGGGACACCCTGGACTACTCGCACAACACCATGGACATGGCG
CTCCAGGCTGAGAAGCTGTTCAATGAGTTCTTCCTGACGGTGAAGGATGCCCTCCGCAGT
CTCCCGGAGTGCGAGGGGCCGTGGAGCGAGCCCGAGCGGCGCCTGGCCGGGGCGCTCACC
GCGGCCAGGGAGCACGTGCACCAGGCGCTATGCGATAATGTGGACACTCGTTCAGCGCTG
GACGCGCTCCGTGAGCTGGTGAGCGCTTGCCACGTGTACCTGGGCGGAGTCGCCGAGGTT
CCCCGGAGCGCCCCGCTACTTCGAGCCTCCGCCCTCTACGTCACCGATATACTCCACGTG
TTTGGAGTCATCGAGGGCCCCCGTGGGCTCATAGGGTTCCCGGCGGCTGGGGCCGGAGAA
GTGGCTCTGGAGGAGGCCGTGCTGCCGTACCTGGAGGTGCTGGGTTCGTTCCGGGCGGAC
GTGCGGGGGGCGGCGCGGCGGGCGGGGGCGGGGGAGGTGCTGACTCTGTGTGACCGCCTG
CGAGACGAGCTGCTGCCCGAGCTGGGCGTGCGGCTCGAGGACAAGCCCGATAGGACGGTG
GTGAAGCTGGTCAACAAGGACGAGCTGATCCGGGAGAGAGAGGAGAGGAAGAGGCAGGAG
GAAGAGAGGCAGAGGAAGAAGAGGGAGCTGGCGGACGCCCAGAGGGCCAAGGACGAGCAG
AAGAAGATACCGCCCGAGGAGATGTTCCGCAGAGAAGCGGGGAAGTACTCGCAGTTTGAC
GAACAGGTCAGTCACCCGCCGGGGCCTCGGGCTCCTCGTCACGATCTCACGAATCCGCAG
GGCCTGCCCACGCACGACCACGAGGGCAAGGAGCTGAGCAAGGGTCTCATCAAGAAGCTG
CAGAAGTTGCAGCAGCTCCAGGAGAAGAAGTACAAGGAACACCTGGCGAGCCTCGGGAAC
TGA
Protein sequence:
MAKRTQPPWSLPSGEEKRPVLNLYNSLTRQKEEFVCGHGNRVNWYSCGPTVYDASHMGHA
RSYISFDILRRVLTTYFGYDVLYAMNITDIDDKIIKRARQNYLYENYVKDTKTLDQIVDD
ATAVIDFYEGIVRDANDPDKKNTLQKMLDSVASAVKTLKSALQESKSDKIEEAKSDLLKS
AKDPISVWLDEKYGATVTENGIFQTLPRYWENEFHKDMKALNVLPPDVLTRVSEYIPQII
TFIQRIIDNGLAYESNGSVYFNVSEFDGKDKHYYARLVPEAYGDNKSLQEGEGDLTDSTA
EKRSLNDFALWKQSKTGEPSWESPWGRGRPGWHIECSAMASDVFGDNLDIHTGGVDLKFP
HHDNELAQSEAHFDKPGWVNYFLHTGHLTIAGCKMSKSLKNFITIKQALEQHSARQLRLA
FLMHGWRDTLDYSHNTMDMALQAEKLFNEFFLTVKDALRSLPECEGPWSEPERRLAGALT
AAREHVHQALCDNVDTRSALDALRELVSACHVYLGGVAEVPRSAPLLRASALYVTDILHV
FGVIEGPRGLIGFPAAGAGEVALEEAVLPYLEVLGSFRADVRGAARRAGAGEVLTLCDRL
RDELLPELGVRLEDKPDRTVVKLVNKDELIREREERKRQEEERQRKKRELADAQRAKDEQ
KKIPPEEMFRREAGKYSQFDEQVSHPPGPRAPRHDLTNPQGLPTHDHEGKELSKGLIKKL
QKLQQLQEKKYKEHLASLGN